|  | @@ -153,16 +153,14 @@ names(contact_file_dump) = chrs
 | 
	
		
			
				|  |  |  
 | 
	
		
			
				|  |  |  # This will not compute sub-domains, but save the intermediate_data that can be used to compute sub-domains latter on
 | 
	
		
			
				|  |  |  CALDER(contact_file_dump=contact_file_dump, 
 | 
	
		
			
				|  |  | -	chrs=chrs, 
 | 
	
		
			
				|  |  | -	bin_size=50E3,
 | 
	
		
			
				|  |  | -	ref_genome=NULL,
 | 
	
		
			
				|  |  | -	feature_track=feature_track,
 | 
	
		
			
				|  |  | -	save_dir=save_dir,
 | 
	
		
			
				|  |  | -	save_intermediate_data=FALSE,
 | 
	
		
			
				|  |  | -	n_cores=2,
 | 
	
		
			
				|  |  | -	sub_domains=FALSE)
 | 
	
		
			
				|  |  | -
 | 
	
		
			
				|  |  | -
 | 
	
		
			
				|  |  | +			chrs=chrs, 
 | 
	
		
			
				|  |  | +			bin_size=50E3,
 | 
	
		
			
				|  |  | +			ref_genome=NULL,
 | 
	
		
			
				|  |  | +			feature_track=feature_track,
 | 
	
		
			
				|  |  | +			save_dir=save_dir,
 | 
	
		
			
				|  |  | +			save_intermediate_data=FALSE,
 | 
	
		
			
				|  |  | +			n_cores=2,
 | 
	
		
			
				|  |  | +			sub_domains=FALSE)
 | 
	
		
			
				|  |  |  ```
 | 
	
		
			
				|  |  |  
 | 
	
		
			
				|  |  |  
 |