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@@ -113,7 +113,7 @@ CALDER_sub_domains(intermediate_data_file,
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| Parameters | Description | Examaple |
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| --------------------- | ----------------------- | ----------------------- |
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-| **contact_tab_straw** | **contact_tab_straw**
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+| **contact_tab_straw** | xx |xx
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| **ref_genome** | One of 'hg19', 'hg38', 'mm9', 'mm10', 'others' (default). |
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| **annotation_track** | A genomic annotation track in data.frame or data.table format. This track will be used for determing the A/B compartment direction and should presumably have higher values | in A than in B compartment. Some suggested tracks can be:
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| **contact_file_hic** | Path to the hic
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Yuanlong LIU