|
|
@@ -36,7 +36,7 @@ if(bin_size==25E3) bin_sizes = c(25E3, 50E3, 100E3)
|
|
|
if(bin_size==40E3) bin_sizes = c(40E3, 80E3)
|
|
|
if(bin_size==50E3) bin_sizes = c(50E3, 100E3)
|
|
|
```
|
|
|
-Note that this strategy is currently only available for `hg19`, `hg38`, `mm9` and `mm10` genome for which we generated high quality reference compartments using Hi-C data from: GSE63525 for `hg19`, https://data.4dnucleome.org/files-processed/4DNFI1UEG1HD/ for `hg38`, GSM3959427 for `mm9`, http://hicfiles.s3.amazonaws.com/external/bonev/CN_mapq30.hic for `mm10`.
|
|
|
+Note that this strategy is currently only available for `hg19`, `hg38`, `mm9` and `mm10` genome for which we generated high quality reference compartments using Hi-C data from: GSE63525 for `hg19`, https://data.4dnucleome.org/files-processed/4DNFI1UEG1HD for `hg38`, GSM3959427 for `mm9`, http://hicfiles.s3.amazonaws.com/external/bonev/CN_mapq30.hic for `mm10`.
|
|
|
|
|
|
### (2) Support for other genomes
|
|
|
|
Yuanlong LIU