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- #!/bin/bash
- source ~/miniconda3/etc/profile.d/conda.sh
- TEST_ENV_NAME="R-Test"
- mamba create --yes --name ${TEST_ENV_NAME} --channel bioconda --channel conda-forge \
- r-essentials r-devtools cooler r-nloptr
- conda activate ${TEST_ENV_NAME}
- R -e "devtools::install('.', dependencies=TRUE, Ncpus = 20)"
- R -e "devtools::test()"
- # conda deactivate
- mamba env remove --yes --name ${TEST_ENV_NAME}
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