GenomeDB/mydata/themes/hardwood/templates/tripal/tripal_feature_expression.tpl.php

<?php

$feature = $variables['node']->feature;


if (!$variables['has_exp'] and $variables['json_exp']) { ?>

 No biomaterial libraries express this feature.

<?php }

else {
  if ($variables['json_exp']) {
    ?>
   <a name="expression-top"> </a>

   <p>
    Hover the mouse over a column in the graph to view expression values. <br>
    <a href='' onclick="expSortDown(); return false;">Sort Descending</a> |
    <a href='' onclick="expSortUp(); return false;">Sort Ascending</a> |
    <a href='' onclick="nonZero(); return false;">Only Non-Zero Values</a> |
    <a href='' onclick="expChart(); return false;">Tile/Chart</a> |
    <a href='' onclick="expNormal(); return false;">Reset</a> |
    <a href="<?php print url('chado/expression/csv', array('query' => array('feature_id' => $feature->feature_id))) ?>">Download</a>
   </p>

    <?php
    tripal_add_d3js();
    $hide_biomaterial_labels = $variables['hide_biomaterial_labels'];
    $json_exp = $variables['json_exp'];
    $limit_label_length = $variables['limit_label_length'];
    $expression_display = $variables['expression_display'];
    $biomaterial_display_width = $variables['biomaterial_display_width']; ?>
   <script> <?php
     print 'heatMapRaw=' . $json_exp . ';';
     print 'maxLength=' . $limit_label_length . ';';
     print 'showLabels=' . $hide_biomaterial_labels . ';';
     print 'col="' . $expression_display . '";';
     print 'colWidth=' . $biomaterial_display_width . ';';
     ?>
   </script>
   <script type="text/javascript">
       Drupal.behaviors.tripal_analysis_expression = {
           attach: function (context, settings) {


               expNormal();
           }
       };
   </script>

    <?php
    //drupal_add_js('/theme/js/expression.js','file');
    //$scripts = drupal_get_js();
    //print $scripts;
    //print drupal_get_path('module','tripal_analysis_expression') . '/theme/js/expression.js';
    ?>
   <figure>

   </figure>

   <a href="#expression-top">back to top</a>

    <script>
     $(function() {
       $('.figure-tripal-data-pane-title.tripal-data-pane-title').html('Expression <?php echo $feature->name?>')
     })
    </script>

    <?php
  }
}