Home Explore Help
Sign In
zhxd2
/
RunFeatureCounts
1
0
Fork 0
Files Issues 0 Pull Requests 0 Wiki
Tree: d517c04fbc
Branches Tags
RunFeatureCount...
/
README.md

README.md 343 B
History Raw

一.安装

  1. 安装依赖R包 argparser, Rsubread, limma, edgeR

  2. 安装本软件

    git clone http://git.genek.cn:3333/zhxd2/RunFeatureCounts.git

二.使用

Rscript ../11.software/RunFeatureCounts/run-featurecounts.R -b ../21.Mapping/BLO_S1_LD1.bam -g ../12.ref/genes.gtf -f exon -a gene_id -i FALSE -s 2 -o BLO_S1_LD1