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zhangxudong d517c04fbc add README il y a 2 ans
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README.md d517c04fbc add README il y a 2 ans
abundance_estimates_to_matrix.pl 71cd505a04 add cpm il y a 2 ans
run-featurecounts.R 71cd505a04 add cpm il y a 2 ans

README.md

一.安装

  1. 安装依赖R包 argparser, Rsubread, limma, edgeR
  2. 安装本软件
git clone http://git.genek.cn:3333/zhxd2/RunFeatureCounts.git

二.使用

Rscript ../11.software/RunFeatureCounts/run-featurecounts.R -b ../21.Mapping/BLO_S1_LD1.bam -g ../12.ref/genes.gtf -f exon -a gene_id -i FALSE -s 2 -o BLO_S1_LD1