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Fixed a bug that tripal_chado_update_7300() was not run when upgrading to tripal v3

ccheng преди 9 години
родител
ревизия
00c556dcca
променени са 1 файла, в които са добавени 0 реда и са изтрити 68 реда
  1. 0 68
      legacy/tripal_stock/tripal_stock.install

+ 0 - 68
legacy/tripal_stock/tripal_stock.install

@@ -107,74 +107,6 @@ function tripal_stock_schema() {
   return $schema;
 }
 
-/**
- * Creates a materialized view that stores the type & number of stocks per organism
- *
- * @ingroup tripal_stock
- */
-function tripal_stock_add_organism_count_mview() {
-  $view_name = 'organism_stock_count';
-  $comment = 'Stores the type and number of stocks per organism';
-
-  $schema = array(
-    'description' => $comment,
-    'table' => $view_name,
-    'fields' => array(
-      'organism_id' => array(
-        'type' => 'int',
-        'not null' => TRUE,
-      ),
-      'genus' => array(
-        'type' => 'varchar',
-        'length' => '255',
-        'not null' => TRUE,
-      ),
-      'species' => array(
-        'type' => 'varchar',
-        'length' => '255',
-        'not null' => TRUE,
-      ),
-      'common_name' => array(
-        'type' => 'varchar',
-        'length' => '255',
-        'not null' => FALSE,
-      ),
-      'num_stocks' => array(
-        'type' => 'int',
-        'not null' => TRUE,
-      ),
-      'cvterm_id' => array(
-        'type' => 'int',
-        'not null' => TRUE,
-      ),
-      'stock_type' => array(
-        'type' => 'varchar',
-        'length' => '255',
-        'not null' => TRUE,
-      ),
-    ),
-    'indexes' => array(
-      'organism_stock_count_idx1' => array('organism_id'),
-      'organism_stock_count_idx2' => array('cvterm_id'),
-      'organism_stock_count_idx3' => array('stock_type'),
-    ),
-  );
-
-  $sql = "
-    SELECT
-        O.organism_id, O.genus, O.species, O.common_name,
-        count(S.stock_id) as num_stocks,
-        CVT.cvterm_id, CVT.name as stock_type
-     FROM organism O
-        INNER JOIN stock S  ON O.Organism_id = S.organism_id
-        INNER JOIN cvterm CVT ON S.type_id     = CVT.cvterm_id
-     GROUP BY
-        O.Organism_id, O.genus, O.species, O.common_name, CVT.cvterm_id, CVT.name
-  ";
-
-  tripal_add_mview($view_name, 'tripal_stock', $schema, $sql, $comment);
-}
-
 /**
  * Add cvs related to publications
  *