spficklin 13 years ago
parent
commit
16586befcd

+ 35 - 0
tripal_analysis_go/theme/tripal_feature/tripal_feature_go_terms.tpl.php

@@ -0,0 +1,35 @@
+<?php
+$feature = $variables['node']->feature;
+$terms = $feature->tripal_analysis_go->terms;
+?>
+<div id="tripal_feature-go_terms-box" class="tripal_feature-info-box tripal-info-box">
+  <div class="tripal_feature-info-box-title tripal-info-box-title">GO Assignments</div>
+  <div class="tripal_feature-info-box-desc tripal-info-box-desc">This <?php print $feature->type_id->name ?> is annotated with the following GO terms.</div>
+  <?php if(count($terms) > 0){ ?>
+  <table id="tripal_feature-go_terms-table" class="tripal_feature-table tripal-table tripal-table-horz">
+    <tr>
+      <th>Category</th>
+      <th>Term Accession</th>
+      <th>Term Name</th>
+    </tr>
+    <?php
+    $i = 0; 
+    foreach ($terms as $term){
+      $class = 'tripal_feature-table-odd-row tripal-table-odd-row';
+      if($i % 2 == 0 ){
+         $class = 'tripal_feature-table-odd-row tripal-table-even-row';
+      }
+      ?>
+      <tr class="<?php print $class ?>">
+        <td><?php print $term->cvname ?></td>
+        <td>GO:<?php print $term->accession?></td>
+        <td><span title="<?php print $term->definition ?>"><?php print $term->goterm ?></span></td>
+      </tr>
+      <?php
+      $i++;  
+    } ?>
+  </table>
+  <?php } else { ?>
+    <div class="tripal-no-results">There are no GO terms for this feature</div> 
+  <?php }?>
+</div>

+ 25 - 0
tripal_analysis_go/theme/tripal_organism/tripal_organism_go_summary.tpl.php

@@ -0,0 +1,25 @@
+<?php
+  $organism = $node->organism;
+  $form = $organism->tripal_analysis_go->select_form['form'];
+  $has_results = $organism->tripal_analysis_go->select_form['has_results'];
+?>
+<div id="tripal_organism-go_summary-box" class="tripal_organism-info-box tripal-info-box">
+  <div  class="tripal_organism-info-box-title tripal-info-box-title">GO Analysis Reports</div>
+  <?php 
+     if($has_results){
+        print $form;
+     } else {
+       ?><div class="tripal-no-results">There are no GO reports avaialble</div><?php
+     }
+  ?>
+  <div id="tripal_analysis_go_org_charts"></div>    
+  <div id="tripal_cv_cvterm_info_box">
+      <a href="#" onclick="$('#tripal_cv_cvterm_info_box').hide()" style="float: right">Close [X]</a>
+      <div>Term Information</div>
+      <div id="tripal_cv_cvterm_info"></div>
+   </div>
+   <div id="tripal_ajaxLoading" style="display:none">
+     <div id="loadingText">Loading...</div>
+   </div>
+</div>
+