|
@@ -4,6 +4,7 @@ require_once "tripal_feature.admin.inc";
|
|
|
require_once "syncFeatures.php";
|
|
|
require_once "indexFeatures.php";
|
|
|
require_once "fasta_loader.php";
|
|
|
+require_once "gff_loader.php";
|
|
|
|
|
|
require_once "tripal_feature.api.inc";
|
|
|
|
|
@@ -125,13 +126,20 @@ function tripal_feature_menu() {
|
|
|
// the administative settings menu
|
|
|
$items['admin/tripal/tripal_feature'] = array(
|
|
|
'title' => 'Features',
|
|
|
+ 'description' => 'Basic Description of Tripal Organism Module Functionality',
|
|
|
+ 'page callback' => 'tripal_feature_module_description_page',
|
|
|
+ 'access arguments' => array('administer site configuration'),
|
|
|
+ 'type' => MENU_NORMAL_ITEM,
|
|
|
+ );
|
|
|
+ $items['admin/tripal/tripal_feature/configuration'] = array(
|
|
|
+ 'title' => 'Configuration',
|
|
|
'description' => 'Settings for Chado Features',
|
|
|
'page callback' => 'drupal_get_form',
|
|
|
'page arguments' => array('tripal_feature_admin'),
|
|
|
'access arguments' => array('administer site configuration'),
|
|
|
'type' => MENU_NORMAL_ITEM,
|
|
|
);
|
|
|
- $items['admin/tripal/fasta_loader'] = array(
|
|
|
+ $items['admin/tripal/tripal_feature/fasta_loader'] = array(
|
|
|
'title' => 'Import a multi-FASTA file',
|
|
|
'description' => 'Load sequences from a multi-FASTA file into Chado',
|
|
|
'page callback' => 'drupal_get_form',
|
|
@@ -139,6 +147,15 @@ function tripal_feature_menu() {
|
|
|
'access arguments' => array('administer site configuration'),
|
|
|
'type' => MENU_NORMAL_ITEM,
|
|
|
);
|
|
|
+ $items['admin/tripal/tripal_feature/gff3_load'] = array(
|
|
|
+ 'title' => 'Import a GFF3 file',
|
|
|
+ 'description' => 'Import a GFF3 file into Chado',
|
|
|
+ 'page callback' => 'drupal_get_form',
|
|
|
+ 'page arguments' => array('tripal_core_gff3_load_form'),
|
|
|
+ 'access arguments' => array('access administration pages'),
|
|
|
+ 'type' => MENU_NORMAL_ITEM,
|
|
|
+ );
|
|
|
+
|
|
|
|
|
|
// managing relationship aggregates
|
|
|
$items['admin/tripal/tripal_feature/aggregate'] = array(
|