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+<?php
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+// Copyright 2010 University of Saskatchewan (Lacey-Anne Sanderson)
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+//
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+// Purpose: Provide layout and content for the basic stock details. This
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+// includes all fields in the chado stock table supplemented with extra
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+// details for each foreign key to provide human-readable output
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+//
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+// Note: This template controls the layout/content for the default stock node
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+// template (node-chado_stock.tpl.php) and the Stock Details Block
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+//
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+// Variables Available:
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+// - $node: a standard object which contains all the fields associated with
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+// nodes including nid, type, title, taxonomy. It also includes stock
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+// specific fields such as stock_name, uniquename, stock_type, synonyms,
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+// properties, db_references, object_relationships, subject_relationships,
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+// organism, etc.
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+// NOTE: For a full listing of fields available in the node object the
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+// print_r $node line below or install the Drupal Devel module which
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+// provides an extra tab at the top of the node page labelled Devel
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+?>
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+
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+<?php
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+ //uncomment this line to see a full listing of the fields avail. to $node
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+ //print '<pre>'.print_r($node,TRUE).'</pre>';
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+?>
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+
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+<?php $organism = $node->organism; ?>
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+
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+<div id="tripal_stock-base-box" class="tripal_stock-info-box tripal-info-box">
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+ <div class="tripal_stock-info-box-title tripal-info-box-title">
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+ <?php print l($node->stock_name, 'node/'.$node->nid); ?>
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+ </div>
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+ <div class="tripal_stock-info-box-desc tripal-info-box-desc"></div>
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+
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+ <?php if($node->is_obsolete == 't'){ ?>
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+ <div class="tripal_stock-obsolete">This stock is obsolete and no longer used in analysis, but is here for reference</div>
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+ <?php }?>
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+ <table class="tripal_stock-table tripal-table tripal-table-vert">
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+ <tr class="tripal_stock-table-odd-row tripal-table-even-row">
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+ <th>Name</th>
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+ <td><?php print $node->stock_name; ?></td>
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+ </tr>
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+ <tr class="tripal_stock-table-odd-row tripal-table-odd-row">
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+ <th nowrap>Unique Name</th>
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+ <td><?php print $node->uniquename; ?></td>
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+ </tr>
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+ <tr class="tripal_stock-table-odd-row tripal-table-even-row">
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+ <th>Internal ID</th>
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+ <?php if (!empty($node->main_db_reference->dbxref_id)) { ?>
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+ <?php
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+ if ($node->main_db_reference->db_urlprefix) {
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+ $accession = l($node->main_db_reference->accession, $node->main_db_reference->db_urlprefix.$node->main_db_reference->accession);
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+ } else {
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+ $accession = $node->main_db_reference->accession;
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+ }
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+ if ($node->main_db_reference->db_url) {
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+ $accession .= ' ('.l($node->main_db_reference->db_name, $node->main_db_reference->db_url).')';
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+ } else {
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+ $accession .= ' ('.$node->main_db_reference->db_name.')';
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+ }
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+ ?>
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+ <td><?php print $accession; ?></td>
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+ <?php } else { ?>
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+ <td></td>
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+ <?php } ?>
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+ </tr>
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+ <tr class="tripal_stock-table-odd-row tripal-table-odd-row">
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+ <th>Type</th>
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+ <td><?php print $node->stock_type; ?></td>
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+ </tr>
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+ <tr class="tripal_stock-table-odd-row tripal-table-even-row">
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+ <th>Organism</th>
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+ <td>
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+ <?php if ($organism->nid) { ?>
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+ <a href="<?php print url("node/$organism->nid") ?>"><?php print $organism->genus ." " . $organism->species ." (" .$organism->common_name ." )"?></a>
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+ <?php
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+ } else {
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+ print $organism->genus ." " . $organism->species ." (" .$organism->common_name ." )";
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+ } ?>
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+ </td>
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+ </tr>
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+ </table>
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+</div>
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