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+<?php
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+// http://www.bluespark.com/blog/drupal-entities-part-3-programming-hello-drupal-entity
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+/**
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+ * Implement hook_entity_info().
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+ */
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+function tripal_entities_entity_info() {
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+ $entities = array();
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+
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+ $entities['cvterm'] = array(
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+ 'label' => t('Vocabulary Term'),
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+ 'uri callback' => 'tripal_entities_vocbulary_term_uri',
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+ 'plural label' => t('Vocabulary Terms'),
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+ 'entity class' => 'TrpVocabularyTerm',
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+ 'controller class' => 'TrpVocabularyTermController',
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+ 'fieldable' => TRUE,
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+ 'entity keys' => array(
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+ 'id' => 'internal_id'
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+ ),
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+ // Bundles are defined by the model types below
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+ 'bundles' => array(),
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+ );
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+
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+ // We want to dynamically add the bundles (or term types) to the entity.
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+ $values = array(
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+ 'cv_id' => array(
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+ 'name' => 'sequence'
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+ ),
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+ 'name' => 'gene'
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+ );
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+ $cvterm = chado_generate_var('cvterm', $values);
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+ $bundle_id = 'trp_' . $cvterm->dbxref_id->db_id->name . '_' . $cvterm->dbxref_id->accession;
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+ $label = preg_replace('/_/', ' ', ucwords($cvterm->name));
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+ $entities['trp_vocabulary_term']['bundles'][$bundle_id] = array(
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+ 'label' => $label,
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+ );
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+ return $entities;
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+}
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+
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+function tripal_entities_load($pid = NULL, $reset = FALSE){
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+ $pids = (isset ($pid) ? array($pid) : array());
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+ $cvterm = trp_vocabulary_term_load_multiple($pids, $reset);
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+ return $cvterm ? reset ($cvterm) : FALSE;
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+}
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+
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+function tripal_entities_load_multiple($pids = array(), $conditions = array(), $reset = FALSE){
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+ return entity_load('cvterm', $pids, $conditions, $reset);
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+}
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+
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+function tripal_entities_menu() {
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+ $items['admin/structure/cvterm/manage'] = array(
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+ 'title' => 'Term Admin',
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+ 'description' => 'Manage cvterm structure',
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+ 'page callback' => 'cvterm_info',
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+ 'access arguments' => array('administer cvterms'),
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+ );
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+ $items['cvterm/%cvterm'] = array(
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+ 'title callback' => 'cvterm_page_title',
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+ 'title arguments' => array(1),
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+ 'page callback' => 'cvterm_page_view',
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+ 'page arguments' => array(1),
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+ 'access arguments' => array('view cvterms'),
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+ 'type' => MENU_CALLBACK,
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+ );
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+
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+
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+ $items['data/gene/add'] = array(
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+ 'title' => 'Add a gene',
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+ 'page callback' => 'cvterm_add',
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+ 'access arguments' => array('create cvterm'),
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+ );
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+ return $items;
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+}
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+
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+function tripal_entities_permission(){
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+ return array(
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+ 'administer cvterms' => array(
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+ 'title' => t('Administer cvterms'),
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+ 'restrict access' => TRUE,
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+ ),
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+ 'view postsits' => array(
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+ 'title' => t('View cvterms'),
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+ )
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+ );
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+}
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+
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+
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+function cvterm_info() {
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+ return ('Welcome to the administration page for your CV Terms!');
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+}
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+
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+function cvterm_page_title($cvterm){
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+ return $cvterm->pid;
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+}
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+
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+function cvterm_page_view($cvterm, $view_mode = 'full'){
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+ $cvterm->content = array();
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+
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+ // Build fields content.
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+ field_attach_prepare_view('cvterm', array($cvterm->pid => $cvterm), $view_mode);
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+ entity_prepare_view('cvterm', array($cvterm->pid => $cvterm));
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+ $cvterm->content += field_attach_view('cvterm', $cvterm, $view_mode);
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+
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+ return $cvterm->content;
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+}
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+
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+
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+function tripal_entities_field_extra_fields() {
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+ $return = array();
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+ $return['cvterm']['cvterm'] = array(
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+ 'form' => array(
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+ 'note' => array(
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+ 'label' => t('Note'),
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+ 'description' => t('Term Note'),
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+ ),
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+ ),
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+ );
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+
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+ return $return;
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+}
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+function tripal_entities_vocbulary_term_uri($cvterm) {
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+ return array(
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+ 'path' => 'cvterm/' . $cvterm->id,
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+ );
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+}
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+
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+function cvterm_add() {
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+ $cvterm = (object) array (
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+ 'pid' => '',
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+ 'type' => 'cvterm',
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+ 'note' => '',
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+ );
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+
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+ return drupal_get_form('cvterm_add_form', $cvterm);
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+}
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+
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+
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+function cvterm_add_form($form, &$form_state, $cvterm) {
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+ $form['note'] = array(
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+ '#type' => 'textfield',
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+ '#title' => t('Note'),
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+ '#required' => TRUE,
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+ );
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+
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+ $form['submit'] = array(
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+ '#type' => 'submit',
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+ '#value' => t('Save'),
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+ );
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+
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+ field_attach_form('cvterm', $cvterm, $form, $form_state);
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+
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+ return $form;
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+}
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+function cvterm_add_form_validate($form, &$form_state) {
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+ $cvterm_submission = (object) $form_state['values'];
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+ field_attach_form_validate('cvterm', $cvterm_submission, $form, $form_state);
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+}
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+
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+function cvterm_add_form_submit($form, &$form_state) {
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+ $cvterm_submission = (object) $form_state['values'];
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+ field_attach_submit('cvterm', $cvterm_submission, $form, $form_state);
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+ $cvterm = cvterm_save($cvterm_submission);
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+ $form_state['redirect'] = "cvterm/$cvterm->pid";
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+}
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+
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+function cvterm_save(&$cvterm) {
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+ return entity_get_controller('cvterm')->save($cvterm);
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+}
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+/**
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+ *
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+ *
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+ */
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+class TrpVocabularyTermController extends DrupalDefaultEntityController {
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+
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+ public function save($cvterm) {
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+// drupal_write_record('cvterm', $cvterm);
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+// field_attach_insert('cvterm', $cvterm);
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+// module_invoke_all('entity_insert', 'cvterm', $cvterm);
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+ return $cvterm;
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+ }
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+
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+}
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Stephen Ficklin