 spficklin
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079f9f0375
Moved form elements from views module to Tripal core and updated seq extract form to use the file upload combo element. Also renamed include files to have a .inc extension rather than a .php extension in the core moduel
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12 vuotta sitten |
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spficklin
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0f48bf25d5
Can now update a publication and it's properties manually
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12 vuotta sitten |
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spficklin
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ed0dad3cf7
Provided some code clenup for the analysis module, added new API functions to the tripal_feature module, and added new case checking to some of the API calls in the Tripal core
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12 vuotta sitten |
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spficklin
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c423725e2a
Updated Doxygen comments
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12 vuotta sitten |
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spficklin
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9e47924937
Edited all admin help pages
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12 vuotta sitten |
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spficklin
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b6444c78ad
Debugging Tripal CV module and created API function for feature relationships
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12 vuotta sitten |
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spficklin
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8098c77257
Fixed memory leaks in OBO loader.
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12 vuotta sitten |
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spficklin
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09b02611ed
Fixed memory leaks in the Tripal core API when storing the persistent connection. Alos fixed memory leaks in GFF loader and added loading of FASTA sequences embeded in the GFF file ##FASTA section
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12 vuotta sitten |
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spficklin
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403d2803cf
Fixed issue #1661530
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12 vuotta sitten |
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spficklin
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e5d5b7c0ca
Fixed support for AHAH. Fixed issue #1879354 by adding an 'accession' field to the add CV term form. Also fixed support for AHAH forms and altered the cv term add/edit to use the Tripal API
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12 vuotta sitten |
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spficklin
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cd87d5a56a
Fixed Drupal formatting standards
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12 vuotta sitten |
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spficklin
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f520b49dfa
Added tripal_db_set_default_search_path() call to hook_init of core module so that the search_path is guranteed to alwasy be 'public' before anything is done
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12 vuotta sitten |
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spficklin
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87400a3502
Added hook to display args in job view
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12 vuotta sitten |
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spficklin
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02155ecfe5
Fixed bug in GFF loader
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12 vuotta sitten |
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spficklin
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0f3e1677ce
Fixed bug where search_path wasn't getting set back to 'default' and tables were being created in the Chado schema rather than the default schema
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12 vuotta sitten |
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spficklin
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c1944ecf5f
Debugging analysis module not instlaling
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12 vuotta sitten |
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spficklin
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63dda37c13
Debugging tables being created in wrong schema
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12 vuotta sitten |
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spficklin
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a5d4d5e7dd
Debugging tables being created in wrong schema
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12 vuotta sitten |
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spficklin
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aaa559f4d9
Removing setting of search path in core init hook
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12 vuotta sitten |
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spficklin
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09e7a7edc6
Fixing bug javascript for determininig Drupal path
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12 vuotta sitten |
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spficklin
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5e017e52c0
Fixing bug javascript for determininig Drupal path
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12 vuotta sitten |
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spficklin
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e95db7502e
Fixed bug in Mview creation
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12 vuotta sitten |
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spficklin
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88c5a5ee89
Speedup optimizations to get bulk loader to work faster. Slowness problems were caused by core modules that set search_path and checked for existence of chado database on every query
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12 vuotta sitten |
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spficklin
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9a282716d5
undoing function call in core init to clean persistent connections
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12 vuotta sitten |
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spficklin
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4caf2a4552
template fixes for bulk loader. Added function in core init to clean persistent connections
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12 vuotta sitten |
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spficklin
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ecd03c3e16
Added an interface for creating custom tables to the Tripa UI
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12 vuotta sitten |
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spficklin
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20ad1ec24a
Updated Chado version checking to recognize an 'effective version', or just the version to the tenth's place.
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12 vuotta sitten |
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spficklin
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c324a8440f
Merged in 6.x-6233304-Support_for_Chado_v1.2 branch and removed non-views stocks page
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13 vuotta sitten |
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spficklin
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3efbf1ed79
Fixed coding standards problems as found by the coder module
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13 vuotta sitten |
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spficklin
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3246f8ecb9
Created a wrapper function for querying the schema API and named all schema API functions with the chado version in the name
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13 vuotta sitten |
