 spficklin
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bf6c2506ff
Fixed memory leaks and speed issues with OBO loader. Also added support for prepared statements for the tripal_core_chado_delete function
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12 years ago |
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spficklin
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bcd4a7eb2a
The OBO loader had a problem where it wouldn't add synonyms. It was a bug in the code. Should be fixed
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12 years ago |
 Lacey Sanderson
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50ee0b3d94
Added ability for field to be null (adds IS NULL to SQL for tripal_core_chado_select. Works with prepared statements.
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12 years ago |
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spficklin
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72d38d10bc
Changed default search_path from 'public' to 'public,chado'
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12 years ago |
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spficklin
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1b2ff73c2d
Changed default search_path from 'public' to 'public,chado'
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12 years ago |
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spficklin
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cd87d5a56a
Fixed Drupal formatting standards
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12 years ago |
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spficklin
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622f9796b3
Fixed bug in core when executing prepared statement. It would not allow an empty text value. Also fixed bug in bulk loader when setting default value if a duplicate record is present on insert.
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12 years ago |
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spficklin
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48dca508d6
Added some debugging code to chado_execute_prepared function
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12 years ago |
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spficklin
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875cddbbcb
Fixed bug where featurelocs weren't showing up if one of the two FK relationships returned NULL
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12 years ago |
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spficklin
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a52dc176d2
Fixed bug where featurelocs weren't showing up if one of the two FK relationships returned NULL
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12 years ago |
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spficklin
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2a743acf56
Made transactions optional in GFF loader. Changed all appropriate db_queryt to chado_query in feature module. Added a drush command to sync a single feature (useful for debugging/testing).
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12 years ago |
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spficklin
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02155ecfe5
Fixed bug in GFF loader
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12 years ago |
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spficklin
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c5da76a2b4
Fixed bug in GFF loader
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12 years ago |
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spficklin
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0f3e1677ce
Fixed bug where search_path wasn't getting set back to 'default' and tables were being created in the Chado schema rather than the default schema
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12 years ago |
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spficklin
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995c9f3198
Fixed the chado instal script. The db_query() calls had been replaced with chado_query() calls which broke the installer
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12 years ago |
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spficklin
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5bd5ec91c0
Fixed bug when setting persistent chado and is an array
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12 years ago |
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spficklin
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816824a412
Debugging analysis module not instlaling
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12 years ago |
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spficklin
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c1944ecf5f
Debugging analysis module not instlaling
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12 years ago |
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spficklin
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63dda37c13
Debugging tables being created in wrong schema
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12 years ago |
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spficklin
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85e468841c
Debugging tables being created in wrong schema
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12 years ago |
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spficklin
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a5d4d5e7dd
Debugging tables being created in wrong schema
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12 years ago |
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spficklin
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7617a8ed44
Fixes to GFF loader and feature install module
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12 years ago |
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spficklin
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774562ff8e
Fixed several memory leask
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12 years ago |
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spficklin
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716bfd6f0f
Truns out serializing the persentent chado connection set it to zero. So this was corrected
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12 years ago |
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spficklin
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6cfe5c467e
When syncing features repetitive error logs were entered into the Drupal report log for every synced feature stating that a duplicate feature could not be inserted. This was fixed
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12 years ago |
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spficklin
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b9b76946e3
Fixed a bug in the function to get the chado version.
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12 years ago |
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spficklin
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95be955377
If a table cannot be expanded because there are no records then it returns a NULL
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12 years ago |
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spficklin
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a040660c76
Added some better fault tolerance if a bad table is given to the chado select API function
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12 years ago |
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spficklin
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c567a18965
Added some better fault tolerance if a bad table is given to the chado select API function
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12 years ago |
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spficklin
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e1a399686c
Added some better fault tolerance if a bad table is given to the chado generate var function
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12 years ago |
