 Risharde Ramnath
|
9035086bfe
Fixed tests that were affected by tag and value checks that have now been removed
|
4 роки тому |
|
Risharde Ramnath
|
5da8b12b88
Unit test - alias/synonym attribute verification
|
4 роки тому |
|
Risharde Ramnath
|
cbf205fced
Unit test - parent verification
|
4 роки тому |
|
Risharde Ramnath
|
ac790a4eeb
Unit test for escaped characters with tag values
|
4 роки тому |
|
Risharde Ramnath
|
5260a06a06
This latest commit detects a bug using the testGFFImporterEscapedTagValueWithComma unit test
|
4 роки тому |
|
Risharde Ramnath
|
085cf9eabd
Tag value unit test added
|
4 роки тому |
|
Risharde Ramnath
|
2f66751d03
2 validation checks for attribute tag name and attribute tag value plus unit test for tag name that contains a comma
|
4 роки тому |
|
Risharde Ramnath
|
bba096323a
Fixed a mix up of validation for ID which should have been for seqid. Removed validation for ID. Altered tests to properly work. Added new test for invalid character in seqid/landmark id
|
4 роки тому |
|
Risharde Ramnath
|
5278d2a50b
Fix for GFF if phase value is invalid + unit tests for the gff phase column that checks for valid and invalid characters
|
4 роки тому |
|
Risharde Ramnath
|
d25737f6e4
GFF loader modification to throw error if strand character is invalid. Added unit test with an invalid strand gff to confirm it works.
|
4 роки тому |
|
Risharde Ramnath
|
ea8b4a0b58
GFF fix for strands that are specified as question marks + finish php unit test for strands
|
4 роки тому |
|
Risharde Ramnath
|
a396ae070a
Added new test to check on score values - integer, double and negative double
|
4 роки тому |
|
Risharde Ramnath
|
da939901ea
Fixed ID regular expression check in GFF loader, added new test for invalid start end values and corresponding test gff file
|
4 роки тому |
|
Risharde Ramnath
|
5e98649061
2 additional unit tests and corresponding gff files related to ID validations for unescaped whitespaces and IDs beginning with right arrow character
|
4 роки тому |
|
Risharde Ramnath
|
baa68f391c
All unit tests now pass, added additional gff files for tests, modified a few functions to correctly do tests, removed dependency on remote files in favour of local files in the data directory for tests.
|
4 роки тому |
|
Risharde Ramnath
|
b2c0291cb4
Fixed testGFFImporterAttributeFastas() test, assertion values were based on the wrong file. Updated with the correct string lengths and md5 values
|
4 роки тому |
|
Risharde Ramnath
|
5f4d0f8b6a
Removed additional gap from small_gene.gff since only one gap variable is allowed per gene. Fixed the test to only look for one gap - test public function testGFFImporterAttributeProperty() {completes correctly
|
4 роки тому |
 Peter Richter
|
62e45b7146
Add unit test for GFF3Importer::loadFastas()
|
4 роки тому |
|
Peter Richter
|
a392175e24
Add unit tests for GFF3Importer Attributes.
|
4 роки тому |
 bradfordcondon
|
5a8103068a
run phpstorm base style formatter
|
5 роки тому |
|
bradford.condon
|
5654bda517
change landmark term
|
6 роки тому |
|
Bradford Condon
|
ea94a3dd70
add test to confirm explicit proteins are still loaded
|
6 роки тому |
|
Bradford Condon
|
a959af7263
fix bug loading taxonomy importer
|
6 роки тому |
|
Bradford Condon
|
e6119f0ff4
change wording anddefaults of variable
|
6 роки тому |
|
Bradford Condon
|
4a7174469f
reorganize tests and add loader category to readme
|
6 роки тому |
