 Stephen Ficklin
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64f6012f93
Fixed a few bugs in web services related to querying
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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52d1570eb8
Fixed various bugs
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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1d6edea07c
Continuing to fix web services to work with new data structures. Added filters for publishing records>
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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de402b67fd
Added new chado_bundle table to link a bundle directly to a chado table. Previously it was mapped via the chado_cvterm_mapping table which mapped cvterms but wasn't exact enough for bundles. Also improved the content creation form to allow for more customization for how bundles are mapped to Chado
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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8af937f449
Adjusted entity creation to use the tripal_cvterm_mapping table
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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ef93343397
Fixed memory leaks in publishing content and memory overload in sequence display
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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7526753974
Working on cleanup of semantic web term assignments for web services
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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76681a2520
Reorganized the TripalField class and removed the attach_info() function. Broke out into two new functions: create_info and create_instance_info. This is better as it doesn't try to lump creating of a field and creating of an instance into one function and it supports all of thesettings for both operations
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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ee2027949d
Added new files for organization of semantic web support
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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876d83dba9
Fixed slowness in publishing records
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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662962e541
Created a chado_semweb table for storing mapping of terms to Chado table columns.
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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c678737409
relationships and residues fields are
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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a44fd31eda
Converting fields over to classes... dbxref_id done.
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%!s(int64=9) %!d(string=hai) anos |
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Stephen Ficklin
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8692c9a368
Added relationship field. Added Chado tokens API functions. Fixed deltion of bundles
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%!s(int64=9) %!d(string=hai) anos |
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Stephen Ficklin
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19e0574373
Somme minor code adjustemnts
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%!s(int64=9) %!d(string=hai) anos |
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Stephen Ficklin
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a7ed0666f8
Fixed merge conflict. Experimenting with entity-level field validation
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%!s(int64=9) %!d(string=hai) anos |
 ccheng
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3af5a94f57
Allowed publishing content (i.e. creating entities) for only synced nodes
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%!s(int64=9) %!d(string=hai) anos |
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Stephen Ficklin
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5e664b919e
edits to ugprade code
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%!s(int64=9) %!d(string=hai) anos |
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ccheng
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eb9dc6b6ca
Finished job submit function for Tripal v2 content migration
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%!s(int64=9) %!d(string=hai) anos |
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Stephen Ficklin
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838e52d75f
Added new hook to allow fields to format their web services array as needed
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%!s(int64=9) %!d(string=hai) anos |
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Stephen Ficklin
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2b07b04d42
Moved publish function to Chado API
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%!s(int64=9) %!d(string=hai) anos |
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Stephen Ficklin
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e698d84256
Publishing (syncing) of records in Chado now working... no filters yet
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%!s(int64=9) %!d(string=hai) anos |
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Stephen Ficklin
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61af51fcbd
Restructured the tripal_bundle and tripal_entity tables
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%!s(int64=9) %!d(string=hai) anos |
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Stephen Ficklin
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1dd17d14c7
Creation of new entities using new TripalTerm, TripalVocab, with all Chado quereis moved to tripal_chado module... is now working!
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%!s(int64=9) %!d(string=hai) anos |
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Stephen Ficklin
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18351daec1
Reorganizging to separate Chado content into new tripal_chado module and created new TripalVocab and TripalTerm entities
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%!s(int64=9) %!d(string=hai) anos |
