Commit History

Author SHA1 Message Date
  Stephen Ficklin 787958a55c Because the prepare is now required for Tripal v2->v3 upgrade I have updated the prepare instructions and removed the skip button 6 years ago
  Shawna Spoor 9096723c9a found deprecated terms that needed to be swapped out 6 years ago
  Shawna Spoor d4ccef15fc changes to bring the tripal chado api module files into naming standards setout in ticket 330 6 years ago
  Lacey Sanderson 6995d06345 Bug Fix: Better error message during prepare chado when fail creating content type. 6 years ago
  Lacey Sanderson b305ab18f8 Chado Prepare Bug: Create Custom table tries to redirect which fails with Drush 6 years ago
  Stephen Ficklin 54e848aee5 Clean-ed up the cv/lookup and added a simple tree browser that could use some improvement 6 years ago
  Stephen Ficklin d9e87077f6 Added support for Phylogenetic Tree content type and visualization field 7 years ago
  Anthony Bretaudeau d15eb0b2c9 various fixes 7 years ago
  Stephen Ficklin 7dd9325d6a Merge remote-tracking branch 'origin/7.x-3.x-installprofile' into 7.x-3.x 7 years ago
  Stephen Ficklin f853f19cb6 Changed Analysis content type to use operation:2945 term. issue #151 7 years ago
  Shawna Spoor 1553ac902d new drush command for installing tripal 7 years ago
  Stephen Ficklin 6b78d9da21 Added biological sample entity type 7 years ago
  Lacey Sanderson baaa1a4cbd Small fixes related to progress reporting for publishing entities. 7 years ago
  Lacey Sanderson 547834a78a Fix to prepare chado which allows the function to be run outside of a Tripal Job. 7 years ago
  Lacey Sanderson 4cbf24071e Ensured that all completed jobs show 100% progress and added arbitrary progress reporting to the Prepare Chado job. 7 years ago
  Stephen Ficklin 841169aa5e Removed unneeded include when launching prepare job 7 years ago
  Lacey Sanderson f9644f2513 Bug Fix during Chado Prepare: unable to look up dbxref due to vocab and accession not being included in the instance details. 7 years ago
  Chun-Huai Cheng 3ac80ad0d6 Added missing chado_cvterm_mapping for Map and Publication entity types 7 years ago
  Lacey Sanderson 4c8f762c15 Prepare Chado: Quick Type fix. 7 years ago
  Stephen Ficklin 0290450c32 Fix to tripal.install and to Chado prepare function 7 years ago
  Stephen Ficklin 0018be0880 Updated TripalImporter 7 years ago
  Stephen Ficklin 74cfacc807 Added upload file permission 7 years ago
  Stephen Ficklin 01b134e1bf Fixed bug in setup/prepare step 7 years ago
  Stephen Ficklin 90bd7cd4e7 Finishgin up TripalJob and TripalImporter classes' 7 years ago
  Stephen Ficklin b646c93885 Fixed bug with upgrade problem from Tripal v1.2 to v1.3 7 years ago