 Stephen Ficklin
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6e3941b018
Fixed the assay.operator_id column so the field works appropriately for it
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6 vuotta sitten |
 Bradford Condon
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b35a2bc8be
Merge branch '7.x-3.x' of https://github.com/tripal/tripal into 7.x-3.x
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6 vuotta sitten |
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Bradford Condon
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5b3ee465e4
add check
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6 vuotta sitten |
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Bradford Condon
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6270f09da0
Merge pull request #410 from tripal/405-tv3-prepare_instructions
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6 vuotta sitten |
 Shawna Spoor
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2ea7e8eb8d
one last fix to address the random null name exceptions that were getting thrown by the plant trait ontology
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6 vuotta sitten |
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Stephen Ficklin
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af98435132
added update function
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6 vuotta sitten |
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Stephen Ficklin
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5d06f20ac2
Fixes to these fields: sep__protocol, schema__additional_type, local__contact.
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6 vuotta sitten |
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Shawna Spoor
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87fd46f30c
still testing this fix to see if it address the slow load time
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6 vuotta sitten |
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Shawna Spoor
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c8a0e23284
fix for the tripal contact obo that addresses problem on my local
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6 vuotta sitten |
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Stephen Ficklin
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177bbaa528
Fixed a typo in the expression
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6 vuotta sitten |
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Shawna Spoor
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a4514e1f9a
this updated loader has loaded the plant trait ontology the GO and the plana ontology
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6 vuotta sitten |
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Stephen Ficklin
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787958a55c
Because the prepare is now required for Tripal v2->v3 upgrade I have updated the prepare instructions and removed the skip button
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6 vuotta sitten |
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Bradford Condon
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5c0cb39e76
Merge pull request #409 from tripal/407-tv3-increased_chado_support
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6 vuotta sitten |
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Stephen Ficklin
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61495b0eb7
This commit adds support for the protocol, assay and arraydesign tables as well as adds many new terms for chado table columns that didn't have terms associated
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6 vuotta sitten |
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Stephen Ficklin
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de91c6400d
This commit adds support for the protocol, assay and arraydesign tables as well as adds many new terms for chado table columns that didn't have terms associated
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6 vuotta sitten |
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Stephen Ficklin
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3da1dfd438
altered the chado_delete_mview to be more consistent for error handling, fixed unit testing for mviews
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6 vuotta sitten |
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Stephen Ficklin
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33d01721a8
Fixed bug in test, and removed old comment from API inline documentation
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6 vuotta sitten |
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Stephen Ficklin
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3d81d81794
Added one more assertion
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6 vuotta sitten |
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Stephen Ficklin
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0b419058d9
Added test for adding a materialized view and issue #322
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6 vuotta sitten |
 Lacey-Anne Sanderson
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1bb999d434
Merge pull request #403 from tripal/pr_template-390
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6 vuotta sitten |
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Bradford Condon
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38c7e99343
minor revisions
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6 vuotta sitten |
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Stephen Ficklin
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7fe5b2743a
Fix for issue #322... still working on unit testing for it
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6 vuotta sitten |
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Bradford Condon
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a3f071c98f
create PR template
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6 vuotta sitten |
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Stephen Ficklin
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c0c13351a7
Merge pull request #399 from tripal/na-tv3-small_fixes
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6 vuotta sitten |
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Stephen Ficklin
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95188570e5
Oh, I found a useless line of code that broke the NewickImporter
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6 vuotta sitten |
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Stephen Ficklin
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133c3b8f4e
Merge pull request #400 from statonlab/na-tv3-small_fixes
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6 vuotta sitten |
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Bradford Condon
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a9aa96dec9
also add test for the pubmed id retrieval taxonomy_ids
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6 vuotta sitten |
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Bradford Condon
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f9cb75aa3a
wrap dbxref in check
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6 vuotta sitten |
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Bradford Condon
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013e845222
add importer test for existing oragnism
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6 vuotta sitten |
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Shawna Spoor
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3a4fd90d77
functional lookup in ebi for term ids passed as names and is_a but still not working for plant trait ontology because of odd is_a implementation within it
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6 vuotta sitten |
