 Stephen Ficklin
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2c23968e96
Merge branch '7.x-2.x' of git.drupal.org:sandbox/spficklin/1337878 into 7.x-2.x
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%!s(int64=11) %!d(string=hai) anos |
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Stephen Ficklin
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205a90209f
nightly checkin. pub module importer form now working
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%!s(int64=11) %!d(string=hai) anos |
 Lacey Sanderson
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209f0864b0
Chado Node API: Created a generic sync form and tripal job function for sync'ing all node types
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%!s(int64=11) %!d(string=hai) anos |
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Stephen Ficklin
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7e6e3a3f21
Contact module now syncs/insert/updates. Templates converted except relationships/publications haven't been tested. Added new Properties API to tripal_core to allow for easy addition of properties to a node form
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%!s(int64=11) %!d(string=hai) anos |
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Stephen Ficklin
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ee855ade6e
All templates for the feature page are converted except featurepos and phenotype needs testing.
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%!s(int64=11) %!d(string=hai) anos |
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Stephen Ficklin
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5f710e226b
Changed Chado API to use array for indicating status of Chado as it was slowing down loaders the previous way
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%!s(int64=11) %!d(string=hai) anos |
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Lacey Sanderson
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d28fa625bb
MViews: Added new default view
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%!s(int64=11) %!d(string=hai) anos |
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Lacey Sanderson
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9babfaab7c
Custom Tables: Added default admin view for new UI
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%!s(int64=11) %!d(string=hai) anos |
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Lacey Sanderson
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9350baa59b
Jobs: Added Views Integration and new default view
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%!s(int64=11) %!d(string=hai) anos |
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Stephen Ficklin
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e03ae0792e
Working on organism theming
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%!s(int64=11) %!d(string=hai) anos |
 spficklin
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7269960a32
Set paths for theme templates
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%!s(int64=11) %!d(string=hai) anos |
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spficklin
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34bfc95115
Nightly checking
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%!s(int64=11) %!d(string=hai) anos |
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Lacey Sanderson
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c8f2fe4064
Updated the tripal views file upload filter handler to work with D7 which included fixing the field_upload_combo form element
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%!s(int64=11) %!d(string=hai) anos |
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Lacey Sanderson
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01e603a540
Further cleaning up of menus including Tripal Project.
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%!s(int64=11) %!d(string=hai) anos |
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Lacey Sanderson
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0b75ae0055
Tweaked Tripal Menus and added help/configure links for Core, CV, DB, Organism, Analysis and Views
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%!s(int64=11) %!d(string=hai) anos |
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spficklin
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aee4f0f3df
Continued work on migrating to Drupal 7 started on db module but still have some of the core API to do, but need other modules for testing
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%!s(int64=11) %!d(string=hai) anos |
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spficklin
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9530be9e77
Chado installer is fully functional in Drupla 7
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%!s(int64=11) %!d(string=hai) anos |
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spficklin
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55d6ec58ba
Start converting tripal_core from 6.x to 7.x
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%!s(int64=11) %!d(string=hai) anos |
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spficklin
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079f9f0375
Moved form elements from views module to Tripal core and updated seq extract form to use the file upload combo element. Also renamed include files to have a .inc extension rather than a .php extension in the core moduel
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%!s(int64=11) %!d(string=hai) anos |
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spficklin
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0f48bf25d5
Can now update a publication and it's properties manually
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%!s(int64=12) %!d(string=hai) anos |
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spficklin
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ed0dad3cf7
Provided some code clenup for the analysis module, added new API functions to the tripal_feature module, and added new case checking to some of the API calls in the Tripal core
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%!s(int64=12) %!d(string=hai) anos |
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spficklin
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c423725e2a
Updated Doxygen comments
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spficklin
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9e47924937
Edited all admin help pages
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spficklin
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b6444c78ad
Debugging Tripal CV module and created API function for feature relationships
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spficklin
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8098c77257
Fixed memory leaks in OBO loader.
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%!s(int64=12) %!d(string=hai) anos |
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spficklin
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09b02611ed
Fixed memory leaks in the Tripal core API when storing the persistent connection. Alos fixed memory leaks in GFF loader and added loading of FASTA sequences embeded in the GFF file ##FASTA section
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%!s(int64=12) %!d(string=hai) anos |
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spficklin
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403d2803cf
Fixed issue #1661530
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spficklin
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e5d5b7c0ca
Fixed support for AHAH. Fixed issue #1879354 by adding an 'accession' field to the add CV term form. Also fixed support for AHAH forms and altered the cv term add/edit to use the Tripal API
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%!s(int64=12) %!d(string=hai) anos |
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spficklin
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cd87d5a56a
Fixed Drupal formatting standards
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%!s(int64=12) %!d(string=hai) anos |
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spficklin
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f520b49dfa
Added tripal_db_set_default_search_path() call to hook_init of core module so that the search_path is guranteed to alwasy be 'public' before anything is done
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