 Stephen Ficklin
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22519a8f6e
Fixed SQL on sequence retrieval for relationships
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11 gadi atpakaļ |
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spficklin
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efc4510943
Added new functionality to sequence extract function to traverse relationships
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11 gadi atpakaļ |
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spficklin
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21b40fa629
Fixed GFF loader to give features with no ID a generic name with 1-based coordinates
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11 gadi atpakaļ |
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spficklin
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937df20c85
Continued development of seq_extract form
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11 gadi atpakaļ |
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spficklin
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2756a7cce1
Added brackets around all table names in SQL statements throughout all of Tripal
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11 gadi atpakaļ |
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spficklin
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e72aea0d18
Added ability to extract sequences by genus and specieswq!
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11 gadi atpakaļ |
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spficklin
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cd87d5a56a
Fixed Drupal formatting standards
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12 gadi atpakaļ |
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spficklin
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2a743acf56
Made transactions optional in GFF loader. Changed all appropriate db_queryt to chado_query in feature module. Added a drush command to sync a single feature (useful for debugging/testing).
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12 gadi atpakaļ |
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Stephen Ficklin
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226018de46
Fixed sequence formatter function & drush command
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12 gadi atpakaļ |
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spficklin
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74ab2abeff
Fixed get sequence drush command
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12 gadi atpakaļ |
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spficklin
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67bca35cf9
Fixed incorrectly named function, added ability to get sequence by analysi_id in sequence retrieval drush command
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12 gadi atpakaļ |
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spficklin
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91184c553b
Fixed the get sequence function to work with Postgres 8.4 and fixed the annotated feature so that it can properly display overlapping parts and show the sequence in reverse complement if on the reverse strand
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12 gadi atpakaļ |
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spficklin
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f0ab1a8a04
Fixed for coding standards
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12 gadi atpakaļ |
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spficklin
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d40033ae9d
Moved code for generating sequence out of the sequence field handler and into an API function in the fature_module. Also created a drush command for extracting sequences
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12 gadi atpakaļ |
