 Stephen Ficklin
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22519a8f6e
Fixed SQL on sequence retrieval for relationships
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11 jaren geleden |
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spficklin
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efc4510943
Added new functionality to sequence extract function to traverse relationships
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11 jaren geleden |
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spficklin
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21b40fa629
Fixed GFF loader to give features with no ID a generic name with 1-based coordinates
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11 jaren geleden |
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spficklin
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937df20c85
Continued development of seq_extract form
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11 jaren geleden |
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spficklin
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2756a7cce1
Added brackets around all table names in SQL statements throughout all of Tripal
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11 jaren geleden |
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spficklin
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e72aea0d18
Added ability to extract sequences by genus and specieswq!
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11 jaren geleden |
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spficklin
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cd87d5a56a
Fixed Drupal formatting standards
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12 jaren geleden |
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spficklin
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2a743acf56
Made transactions optional in GFF loader. Changed all appropriate db_queryt to chado_query in feature module. Added a drush command to sync a single feature (useful for debugging/testing).
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12 jaren geleden |
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Stephen Ficklin
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226018de46
Fixed sequence formatter function & drush command
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12 jaren geleden |
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spficklin
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74ab2abeff
Fixed get sequence drush command
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12 jaren geleden |
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spficklin
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67bca35cf9
Fixed incorrectly named function, added ability to get sequence by analysi_id in sequence retrieval drush command
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12 jaren geleden |
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spficklin
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91184c553b
Fixed the get sequence function to work with Postgres 8.4 and fixed the annotated feature so that it can properly display overlapping parts and show the sequence in reverse complement if on the reverse strand
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12 jaren geleden |
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spficklin
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f0ab1a8a04
Fixed for coding standards
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12 jaren geleden |
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spficklin
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d40033ae9d
Moved code for generating sequence out of the sequence field handler and into an API function in the fature_module. Also created a drush command for extracting sequences
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12 jaren geleden |
