 spficklin
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6b1bb766f0
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14 years ago |
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spficklin
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00255b8cda
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14 years ago |
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spficklin
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0ef2985939
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14 years ago |
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spficklin
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d8567d8967
updates to blast, core, gff loader, etc... fixed several bugs
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14 years ago |
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spficklin
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6610387e7c
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14 years ago |
 laceysanderson
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26939a277a
Added to documentation of tripal_feature using doxygen standards
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14 years ago |
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spficklin
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c616bca1ea
Add analysis requirement to GFF loader
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14 years ago |
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spficklin
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8d69585f9d
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14 years ago |
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spficklin
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19b39807e6
Theming corrections
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14 years ago |
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spficklin
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debd75ebbc
Feature type chart summary now in new template
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14 years ago |
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spficklin
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711c607d66
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14 years ago |
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spficklin
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5096c81f20
Fixed one more bug with missing feature browser
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14 years ago |
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spficklin
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3e2049c624
Fixed feature browser not appearing
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14 years ago |
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spficklin
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eff151490d
More work on theming for analysis go, organism and feature
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14 years ago |
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spficklin
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4d8dbf326e
Fixed theming so that all variables are populated for the default node theme, but only variables needed for the block are populated
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14 years ago |
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spficklin
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bc06d86bf6
Various bug fixes and themeing issues
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14 years ago |
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spficklin
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bcb9dedeb5
Continued fixes to the theming
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14 years ago |
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spficklin
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ad41f63300
Separated out theming
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14 years ago |
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laceysanderson
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1c59d38e68
Re-arranged feature admin menu including adding the feature module description stub and moving the gff loader from core to feature
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14 years ago |
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spficklin
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5251d6158e
Adding aggregator to feature module
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14 years ago |
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spficklin
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536b013486
Renamed admin.php to tripal_feature.admin.inc
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14 years ago |
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spficklin
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492099386d
Updates to the Feature module
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14 years ago |
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spficklin
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4c62dd3793
:
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14 years ago |
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spficklin
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a52a64b19b
Corrected the feature insert to use uniquename, organism_id and type_id to check for uniqueness. This correction also required naming the Drupal nodes uniquely as well. Also added support for Relationships on the feature page and showing the sequences for relationships.
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14 years ago |
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laceysanderson
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068b975f28
Added Views Integration for tripal_feature
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14 years ago |
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spficklin
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3ab974ee52
Added a new tripal_set_active_db function to replace Drupal's set_active_db function. This function allows Tripal to use a chado database in an external location or a chado database within another schema within the Drupal database. This keeps backwards compatibility with older versions of Tripal.
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14 years ago |
 ccheng
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db70fc1dc6
fixed problems where strcmp() expects a string, not an array.
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14 years ago |
 mestato
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e6feb5a9b6
Moved the synchronize functions from the main module to syncFeatures.php. Moved the search indexing functions to indexFeatures.php. This allows each sync or index job to be submitted as a separate system call, thus circumventing a problem with php not releasing memory. Also, syncing and indexing all features may now be done through a command line call instead of only through the web interface.
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14 years ago |
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mestato
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a957c97937
When taxonomy is assigned to a node, all analyses are included, not just one.
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14 years ago |
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spficklin
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d9d2e156a4
Fixed a bug that added error messages to the administration form for features and did not properly set the defaults for some of the fields
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15 years ago |
