 Lacey Sanderson
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d1e2c7bbe2
Update tripal to use Feature & Publication API. Tripal now uses all it's own new APIs
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%!s(int64=10) %!d(string=hai) anos |
 Stephen Ficklin
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248ba11710
Fixed bugs in feature module
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%!s(int64=10) %!d(string=hai) anos |
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Stephen Ficklin
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8532182bd8
Fixed bugs in feature module
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%!s(int64=10) %!d(string=hai) anos |
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Stephen Ficklin
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292c77714f
Fixed sequence extraction and display for drush command and on feature pages
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%!s(int64=11) %!d(string=hai) anos |
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Stephen Ficklin
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ddf18ece9e
Added missing files to example module. Working on default CV form
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%!s(int64=11) %!d(string=hai) anos |
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Stephen Ficklin
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e6e017890c
Made additional adjustments to sequence page
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%!s(int64=11) %!d(string=hai) anos |
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Stephen Ficklin
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3b15f3b503
Nightly checkin .... fixed some issues that caused log entries. working on adding CDS sequences to sequence page
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%!s(int64=11) %!d(string=hai) anos |
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Stephen Ficklin
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979660aa34
Renamed include files in the tripal_core module that didn't get renamed. Fixed sequence template to better handle original, alignment and protein sequences
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%!s(int64=11) %!d(string=hai) anos |
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Lacey Sanderson
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c6fe145450
API: changed names again... hopefully the last time :)
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%!s(int64=11) %!d(string=hai) anos |
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Lacey Sanderson
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e8d5ef6ddb
API: finished feature api including creating chado_associate_dbxref/cvterm
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%!s(int64=11) %!d(string=hai) anos |
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Lacey Sanderson
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2e42460830
Merge branch '7.x-2.x' of git.drupal.org:sandbox/spficklin/1337878 into 7.x-2.x
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%!s(int64=11) %!d(string=hai) anos |
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Lacey Sanderson
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00d77d137e
API: Consolidated chado_delete_property/ID and chado_update_property/ID
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%!s(int64=11) %!d(string=hai) anos |
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Lacey Sanderson
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a73d2fa391
Feature: cleaned up and added doc
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%!s(int64=11) %!d(string=hai) anos |
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Stephen Ficklin
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c1b87f555b
Converted old API functions to new functions
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%!s(int64=11) %!d(string=hai) anos |
 Stephen Ficklin
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6d5887d2d3
converted all watchdog calls to the new Tripal API function
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%!s(int64=11) %!d(string=hai) anos |
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Lacey Sanderson
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3d39ea2833
Documention: Small tweaks to the documentation to get the defn groups to display properly in the api site
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%!s(int64=11) %!d(string=hai) anos |
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Stephen Ficklin
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df26ed8bea
Stock templates converted. Fixed some other templates
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%!s(int64=11) %!d(string=hai) anos |
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Stephen Ficklin
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3df9593c8c
Cleaned out unused functions from feature module
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%!s(int64=11) %!d(string=hai) anos |
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Stephen Ficklin
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ee855ade6e
All templates for the feature page are converted except featurepos and phenotype needs testing.
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%!s(int64=11) %!d(string=hai) anos |
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Stephen Ficklin
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a77526a07e
Removed ability to preview nodes. The templates are messed up in preview and it's easier to just remove the button
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%!s(int64=11) %!d(string=hai) anos |
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spficklin
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34bfc95115
Nightly checking
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%!s(int64=11) %!d(string=hai) anos |
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spficklin
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d922b7a57b
Fixed minor coding review problems
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%!s(int64=11) %!d(string=hai) anos |
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Stephen Ficklin
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22519a8f6e
Fixed SQL on sequence retrieval for relationships
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%!s(int64=11) %!d(string=hai) anos |
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Stephen Ficklin
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1d831e53d8
Fixed bugs with the sequence extraction when traversing relationships
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%!s(int64=11) %!d(string=hai) anos |
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spficklin
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9b667e1547
Added new functionality to sequence extract function to traverse relationships
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%!s(int64=11) %!d(string=hai) anos |
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spficklin
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8762ae675c
Trying to fix bug in feature API call to extract feature sequence from alignment
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%!s(int64=11) %!d(string=hai) anos |
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Stephen Ficklin
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086eb4b649
Fixed bug in sequence retreval API function if parent has no residues
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%!s(int64=11) %!d(string=hai) anos |
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Stephen Ficklin
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0ab56cac4a
Updated defline of seq retreival API function to include genus and species of parent equence
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%!s(int64=11) %!d(string=hai) anos |
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Stephen Ficklin
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1f1a1c213a
Updated seq extract with better from field descriptions
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%!s(int64=12) %!d(string=hai) anos |
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spficklin
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2756a7cce1
Added brackets around all table names in SQL statements throughout all of Tripal
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%!s(int64=12) %!d(string=hai) anos |
