 Stephen Ficklin
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3b8c1d6b63
Fixed bug with cvtermynonym being wiped out after OBO loading in Chado prepare step
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7 years ago |
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Stephen Ficklin
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c475797679
Fixed bug in chado_set_active that was cuasing the search path to not get reset
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7 years ago |
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Stephen Ficklin
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a0be583029
Fixed problems with upgrade from T2 to T3
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7 years ago |
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Stephen Ficklin
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298111586d
Added Tripal Views to Tripal v3 (non legacy) and renamed Tripal Chado Views. Fixed several bugs, removed unneeded files
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7 years ago |
 Chun-Huai Cheng
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ece6c4fc47
Fixed bugs for display of custom field title and empty text. Fixed lots of bugs for data__accession, md5checksum, synonym, relationship fields.
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7 years ago |
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Stephen Ficklin
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ca1ea98eed
Minor change to inline textrea fields
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7 years ago |
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Stephen Ficklin
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43b73641c2
unlocked all fields... need to revisit that. Fixed bug with theming legacy templaates
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7 years ago |
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Stephen Ficklin
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f1deb07241
Added field for the publications to display records they link to. Added button to check for new fields for a bundle. Fixed ajax loading so titles don't appear
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8 years ago |
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Chun-Huai Cheng
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742e3d72ac
Fixed bugs found when saving an organism or a feature
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8 years ago |
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Stephen Ficklin
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cac91404aa
Added NCBI Taxonomy importer. Phylotree importer added too but it needs some work
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8 years ago |
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Stephen Ficklin
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3dcab18d45
Added a new chado_db_select that mirrors Drupal's db_select but is Chado aware. Added a new query() function to the ChadoField class to allow for Chado fields to support querying of their own data
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8 years ago |
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Stephen Ficklin
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9b8ddcc83b
Got field querying working. Web services working again. Added theme function to TripalFieldWidget class
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8 years ago |
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Stephen Ficklin
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de402b67fd
Added new chado_bundle table to link a bundle directly to a chado table. Previously it was mapped via the chado_cvterm_mapping table which mapped cvterms but wasn't exact enough for bundles. Also improved the content creation form to allow for more customization for how bundles are mapped to Chado
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8 years ago |
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Stephen Ficklin
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23e01ef2f4
Moved Chado settings from field to instance
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8 years ago |
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Stephen Ficklin
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a71c957ea6
Removed property of TripalField as it's not used until field_create_field function. It's been put in the array. Also properties types are automatically added for all types in the database
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8 years ago |
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Stephen Ficklin
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645f323d9b
Updated theme bug
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8 years ago |
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Stephen Ficklin
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b279f7c64c
Added dbxref_id field/widget/formatter
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8 years ago |
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Stephen Ficklin
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6957932829
Adding new subclasses for fields/widgets/formatters
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8 years ago |
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Stephen Ficklin
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32a1a3918c
Fixed issue saving properties. Moved field admin form alter to the Chado module. Fixed labels and descriptions on property widgets
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8 years ago |
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Stephen Ficklin
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c92894ddd2
Fixing fields to be compatible with updated TripalField class
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8 years ago |
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Chun-Huai Cheng
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2a1acbcd0a
Themed relationship admin form option2
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8 years ago |
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Stephen Ficklin
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16e680ac6c
Working on TripalField redo
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8 years ago |
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Stephen Ficklin
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702676c7ef
Moved tripal_cv_defaults to legacy... can move back if needed
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8 years ago |
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Stephen Ficklin
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8af937f449
Adjusted entity creation to use the tripal_cvterm_mapping table
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8 years ago |
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Chun-Huai Cheng
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563e9efe75
Added a chado base table dropdown so when adding a Tripal Content Type, a default table can be selected
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8 years ago |
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Chun-Huai Cheng
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b4a74cc2fa
Created tripal_cvterm_mapping table when installing tripal_chado. Fixed function tripal_chado_map_cvterms() to populate the table
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8 years ago |
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Stephen Ficklin
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6cd8b469b8
Fixes from 2.x copied over to 3.x
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8 years ago |
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Chun-Huai Cheng
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8d748b7c26
Added a vocabulary column to the semantic web term list table. Added a function to reset the use of a sematic web term. Added a cancel option when editing/reseting a semantic web term.
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8 years ago |
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Chun-Huai Cheng
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8d2332bb84
Added list/edit forms for changing semantic web settings
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8 years ago |
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Chun-Huai Cheng
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e0a6c08566
Added form for setting up semantic web terms
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8 years ago |
