 spficklin
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841aaa543d
added the tripal_get_custom_schema to the tripal_core_get_chado_table_schema_function. This will allow the tripal_core_chado_insert (etc) functions to work with custom tables as well. Had to fix other places in the views integration where the tripal_get_custom_schema was being called.
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12 éve |
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spficklin
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ecd03c3e16
Added an interface for creating custom tables to the Tripa UI
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12 éve |
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spficklin
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2840b98e85
All node types (except stock) have a function to cleanup orphaned nodes but it wasn't complete for some. A new core API function was created that all modules with node types can use to clean up orphaned nodes. Also, the drush trpjob-run command was fixed so that a username must be provided to run the job
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12 éve |
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spficklin
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ef9e217d60
Fixed a bug in FK statement name construction in tripal_core_chado_[select/insert/update/delete]
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12 éve |
 Lacey Sanderson
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3f0763b237
Made foreign key statement names include number of args to make unique for bulk loader
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12 éve |
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Lacey Sanderson
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fb2790a90e
Added tripal_core_chado_prepare and tripal_core_chado_execute_prepared. Also added checking to ensure all arguments for a prepared statement are present before executing and added arguement comparison before saying a statement is already prepared
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12 éve |
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spficklin
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38daa52d75
Re-arranged file structure for tripal_analysis and tripal_cv. Also fixed but in tripal core
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12 éve |
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spficklin
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48f972cd1b
Bug fixes
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12 éve |
|
spficklin
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feb56cc3c2
Oops left in debugging code
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12 éve |
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spficklin
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76cea3664f
Fixed some memory leaks in GFF loader and in the Core API
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12 éve |
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spficklin
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094ec69bde
Added prepared statements for tripal_core_chado_update and fixed it so that queiries for FK, UQ and PK constraints use prepared statements too. Altered GFF loader so that all queries use prepared statements
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12 éve |
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Lacey Sanderson
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31d173505b
Changed chado_query to no longer touch and changed chado_install.php to use chado_query
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12 éve |
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spficklin
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af9610a24e
Fixed chado installer to give more noticeable failure warning, and to continue on failure
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12 éve |
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spficklin
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20ad1ec24a
Updated Chado version checking to recognize an 'effective version', or just the version to the tenth's place.
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12 éve |
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spficklin
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47a0862d5a
Added warning message if Drupal version is not v1.11 or v1.2. Tripal won't work without one of these versions
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12 éve |
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spficklin
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c04935cb5b
Added warning message if Drupal version is not v1.11 or v1.2. Tripal won't work without one of these versions
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12 éve |
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spficklin
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422684b8d2
Added warning message if Drupal version is not v1.11 or v1.2. Tripal won't work without one of these versions
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12 éve |
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spficklin
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5816ad9df7
added a field and filter handler for a sequence. Also fixed a fwe butgs in the gff loader, added a new function in the feature API for generating a reverse compliment
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12 éve |
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spficklin
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b98067e791
Renamed custom handlers
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12 éve |
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spficklin
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339b75cf0d
added an is_prepared option to skip the automatic checking to see if the statement is prepared
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12 éve |
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spficklin
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92f19d2f79
Added prepared statements for selects
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12 éve |
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spficklin
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c324a8440f
Merged in 6.x-6233304-Support_for_Chado_v1.2 branch and removed non-views stocks page
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12 éve |
|
spficklin
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e52f91d1b9
Corrected earlier incorrect bug fix
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12 éve |
|
spficklin
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721ee72be0
Fixed a small bug
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12 éve |
|
spficklin
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68a37da61e
Fixed a bug in the tripal_core API select function. If the function recursed due to a foreign key relationship but returned nothing it would cause errors as the select statement would still try to build the SQL statement with no values for the where clause.
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12 éve |
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spficklin
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5340d4b068
Added FK relationships to v1.11 schema API and adjusted hooks to remove FK definitions in other modules
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12 éve |
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spficklin
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3246f8ecb9
Created a wrapper function for querying the schema API and named all schema API functions with the chado version in the name
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12 éve |
