Lacey Sanderson
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93bee06bd0
Removed all Old-style views integration
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12 vuotta sitten |
Lacey Sanderson
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0ec9c56953
Added new-style views integration for feature, genetic, library, natural diversity, phenotype, project, pub, and stock modules
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12 vuotta sitten |
Lacey Sanderson
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c4b710a2b1
Added support to indicate if base_table or not and made this distinction for analysis, contact, cv ,db, feature and organism integration
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12 vuotta sitten |
Lacey Sanderson
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177138758c
Separated out custom tables and legacy mviews in the list of tables integrated.
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12 vuotta sitten |
Lacey Sanderson
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fa17f954bc
Merged in 6.x-0.4-dev branch
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12 vuotta sitten |
Stephen Ficklin
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d0475de3a5
Adjusted Tripal Views to refer to old materialized views as Legacy MViews and to not include newer Schema API vies in the list of Legacy views
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12 vuotta sitten |
Stephen Ficklin
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31fd6b185b
Adjusted Tripal Views to refer to old materialized views as Legacy MViews and to not include newer Schema API vies in the list of Legacy views
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12 vuotta sitten |
Stephen Ficklin
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21f247f98e
Added functionality to the Feature Summary Report on the organism page so that site admins can customize which terms appear in the list and rename the terms to make them more legible. By default the report behaves the same
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12 vuotta sitten |
Stephen Ficklin
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a56102450e
Changed MViews to accept a Schema API array. It is still backwards compatible and can accept old style postgres column definitions. Also, MViews created with a Drupal API schema array are automatically integreated as a custom table and therefore can be used to join with other MViews or Chado tables in the Views Integration
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12 vuotta sitten |
Stephen Ficklin
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0b0d4e1f49
Removed the old cvterm.php file as those API functions have been replaced. All call to those old functions have been removed
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12 vuotta sitten |
Stephen Ficklin
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308000ead1
various bug fixes.. can't remember all
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12 vuotta sitten |
Stephen Ficklin
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9e575bc651
Removed & on line 812 of tripal_library.module
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12 vuotta sitten |
Stephen Ficklin
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6d9de99026
Merged in 6.x-0.4-1589084-feature_props
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12 vuotta sitten |
Stephen Ficklin
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2daa180827
fixed stdClass problem
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12 vuotta sitten |
Stephen Ficklin
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b8ccf71124
fixed stdClass problem
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12 vuotta sitten |
Stephen Ficklin
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b4b47f64c9
Fixed bug in tripal_cv_add_cvterm where the name was used to uniquely identify a cvterm. This may not be the case if the name has changed in future versions
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12 vuotta sitten |
Stephen Ficklin
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b6ae576a7b
testing a fix
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12 vuotta sitten |
Stephen Ficklin
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953797bb83
testing a fix
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12 vuotta sitten |
Stephen Ficklin
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131a581314
various code adjustments -- can't remember
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12 vuotta sitten |
Lacey Sanderson
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f7ae46e4cd
Bug Fix: Symbolic link turned to file with path in it. Removed handlers linked to by symbolic link and instead put in tripal_views
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12 vuotta sitten |
Stephen Ficklin
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4485e002a8
Adjustements to drush trpjbs-run
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12 vuotta sitten |
Stephen Ficklin
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de06d332f4
Adjustements to drush trpjbs-run
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12 vuotta sitten |
Stephen Ficklin
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2adbec5adc
Removed code for the tripal blast analysis module that was present in the tripal analysis module
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12 vuotta sitten |
Stephen Ficklin
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e03f5d2e67
Some changes to tripal_core_chado_create_table API function
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12 vuotta sitten |
Stephen Ficklin
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bcc8d13f15
Added a new API call for creating tables in Chado
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12 vuotta sitten |
Stephen Ficklin
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c0d1e82f08
incremental commit to keep from losing work
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13 vuotta sitten |
Stephen Ficklin
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ac311d7fc4
fixed syntax errors in tripal_Feature.api.inc
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13 vuotta sitten |
Stephen Ficklin
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87a16fbff7
Added new select/insert/delete/update for featureprop and analysisfeatureprop tables. Also added update_property_by_id and delete_property_by_id functions to the core API. Added a new drush command to launch jobs
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13 vuotta sitten |
Lacey Sanderson
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cba23f4cec
Issue #1578342: Added tripal-current-job and tripal-update-mview drush commands
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13 vuotta sitten |
Lacey Sanderson
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522d8c13ef
Fix to tripal_jobs_check_running(): now uses ps rather then postix_kill since postix_kill might unintentionally kill jobs on some OSes
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13 vuotta sitten |