 Stephen Ficklin
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947eca28bc
Fixed merge conflict
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há 6 anos atrás |
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Stephen Ficklin
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ccd6b1410d
Removed local__gbrowse_image field. it will go to the trpfancy_fields module
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há 6 anos atrás |
 Lacey-Anne Sanderson
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655f00058f
Merge branch '7.x-3.x' into 432-tv3-array_desgin_field
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há 6 anos atrás |
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Stephen Ficklin
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728e4f903f
Merge branch '7.x-3.x' into 141-tv3-field_namespace
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há 6 anos atrás |
 Lacey Sanderson
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0651abd15c
removed dpm
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há 6 anos atrás |
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Stephen Ficklin
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f4d1c3d941
fixes requested for PR
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há 6 anos atrás |
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Stephen Ficklin
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c4de0e599d
Since I was adding back in broken fields, I added in the so__transcript field and fixed it
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há 6 anos atrás |
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Stephen Ficklin
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a27b2f798a
While trying to fix this the wrong CDS problem I needed the so__cds field to work (which it now is with this commit). I also added a jbrowse viewer so I could easily see how the genes are supposed to look
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há 6 anos atrás |
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Stephen Ficklin
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9281ae2297
Removed code that accidentaly got in from a previous PR
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há 6 anos atrás |
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Stephen Ficklin
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ccb92b7359
Added warning messages when namespace conflicts occur with fields (i.e. the same term is used multiple times
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há 6 anos atrás |
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Stephen Ficklin
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d34e109ac0
Added analysis field for issue #210
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há 6 anos atrás |
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Stephen Ficklin
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019a0b491b
Resoled issue #432
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há 6 anos atrás |
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Stephen Ficklin
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6e3941b018
Fixed the assay.operator_id column so the field works appropriately for it
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há 6 anos atrás |
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Stephen Ficklin
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5d06f20ac2
Fixes to these fields: sep__protocol, schema__additional_type, local__contact.
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há 6 anos atrás |
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Stephen Ficklin
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177bbaa528
Fixed a typo in the expression
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há 6 anos atrás |
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Stephen Ficklin
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de91c6400d
This commit adds support for the protocol, assay and arraydesign tables as well as adds many new terms for chado table columns that didn't have terms associated
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há 6 anos atrás |
 Shawna Spoor
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9096723c9a
found deprecated terms that needed to be swapped out
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há 7 anos atrás |
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Stephen Ficklin
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76c58b2330
Fixed leftover bugs from yesterdays changes. Fixed FASTA downloaders
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há 7 anos atrás |
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Stephen Ficklin
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630f3d99ff
Fixed issue #255
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há 7 anos atrás |
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Stephen Ficklin
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00454a5261
Merge pull request #254 from statonlab/staton/protocol_field
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há 7 anos atrás |
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Stephen Ficklin
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a71dfda64d
Fixed issues with the additionalType field and addressing issue #234
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há 7 anos atrás |
 bradfordcondon
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0bc12b8379
declare protocol field in tripal_chado fields
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há 7 anos atrás |
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Stephen Ficklin
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3dd3de9f90
Fixed issue with phylgenetic tree viewer showing up on other content types
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há 7 anos atrás |
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Stephen Ficklin
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d9e87077f6
Added support for Phylogenetic Tree content type and visualization field
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há 7 anos atrás |
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Stephen Ficklin
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ccde805a45
Added necessary code to support the biomaterial table
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há 7 anos atrás |
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Stephen Ficklin
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85d98bdce0
Added an email term for contacts
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há 7 anos atrás |
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Stephen Ficklin
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d95e68d23d
Fixed a few minor bugs. Added the cvtermpath menu item back from Tv2 legacy code. Added an upated to fix a bad cvterm, and fixed the label for the analysis algorithm field
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há 7 anos atrás |
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Stephen Ficklin
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166bc948e7
Fixed bug in the chado schema definitions for the featuremap_dbxref and featuremap_pub tables. These bugs are actually in the Chado schema but cause problems if not fixed. Also fixed issues with database cross reference and relationship fields
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há 7 anos atrás |
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Stephen Ficklin
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182e0fb079
Fixed synonym field. Fixed issue #127
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há 7 anos atrás |
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Stephen Ficklin
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d5038d1901
Fixed publication properties so they are more convenient, and fixed some fields
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há 7 anos atrás |
