 spficklin
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97a17838bf
Oops forgot to add the new pub_form.inc file
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12 gadi atpakaļ |
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spficklin
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155fd7da22
Continued updates to the pub module. Added a warning to the bulk loader to fail if the table description cannot be found. This could happen if a loader uses a custom table and the loader is exported to another database without the custom table
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12 gadi atpakaļ |
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spficklin
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33f7af8e70
Fixed bug in tripal_core_chado_execute_prepared when checking if a field is 'text'. Rather than cause an error if the value is not text, it automatically converts it to text
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12 gadi atpakaļ |
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spficklin
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5abfa152c7
Changed feature_add_synonmys function to not use a space, but a carriage return
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12 gadi atpakaļ |
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Stephen Ficklin
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53deb6a869
Fixed bug where the table name wasn't being prefixed with 'chado.'
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12 gadi atpakaļ |
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spficklin
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a348e4f2d7
Added new term to tpub.obo
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12 gadi atpakaļ |
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spficklin
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207e9a0c4c
Updated publication updater/importer to look at accession first to find a a pub before inserting
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12 gadi atpakaļ |
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Stephen Ficklin
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69ce3b1886
Fixed bug in matching of publication to title/year if year is missing
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12 gadi atpakaļ |
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spficklin
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6597317510
Added term to tpub.obo
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12 gadi atpakaļ |
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spficklin
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56aa9501c3
Fixed some bugs and added ability to turn of creation of contacts for each author in the importer and upater
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12 gadi atpakaļ |
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spficklin
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432fe4a76d
Added drush update function to update publications
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12 gadi atpakaļ |
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spficklin
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4cce871896
Continued development on contact and pub modules
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12 gadi atpakaļ |
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spficklin
|
4d175ad440
Oops forgot to remove a require line
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12 gadi atpakaļ |
|
spficklin
|
d2537148f1
Merge branch '6.x-1.x' of git.drupal.org:sandbox/spficklin/1337878 into 6.x-1.x
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12 gadi atpakaļ |
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spficklin
|
b405ae3afb
Continued development of Contact and Publiation modules
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12 gadi atpakaļ |
 Lacey Sanderson
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867229ac5d
Fix to chado join handler that add's alias' to each table added to satisfy foreign key constraint. This takes into account the edge case where there are two foreign key calls to the same table.
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12 gadi atpakaļ |
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Lacey Sanderson
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84e6357dfc
Added ability to add additional joins through the tripal views chado aggregate join handler
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12 gadi atpakaļ |
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Lacey Sanderson
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5eecd98053
Fixed bug in chado aggregate join handler: now handles null values in the all field without collapsing the entire results to null. Uses a combination of coalesce to only return non-null results and cast to ensure all fields are strings
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12 gadi atpakaļ |
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laceysanderson
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6d91e0e13c
Some custom views handlers re-use fields, changes were made to ensure tripal_views_handler_field_aggregate works in these cases
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12 gadi atpakaļ |
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spficklin
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2756a7cce1
Added brackets around all table names in SQL statements throughout all of Tripal
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12 gadi atpakaļ |
|
Lacey Sanderson
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9a06d23ba4
Merge branch '6.x-1.x' of git.drupal.org:sandbox/spficklin/1337878 into 6.x-1.x
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12 gadi atpakaļ |
|
Lacey Sanderson
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f13ec4c7ed
Updated the tripal_views_handler_field_aggregate handler so it actually works...
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12 gadi atpakaļ |
|
Lacey Sanderson
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acf539de59
Small fixes to some of the basic views handlers. Need to ensure that values are arrays before looping and that aliases exist before using
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12 gadi atpakaļ |
|
Lacey Sanderson
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381324db40
Removed some legacy code from tripal stock views integration
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12 gadi atpakaļ |
|
spficklin
|
fc8149faec
Updated the GFF loader to add a date timestamp to the uniquename if none is provided in the GFF file. This ensures that the value will always be unique. Also, updated the GFF file to use the landmark_type provided by the user to look for the landmark if one is provided. Also changed the GFF loader so that it will recognize an entry for landmark using either the uniquename or the name
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12 gadi atpakaļ |
|
spficklin
|
20c460c818
Continued development on pub module
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12 gadi atpakaļ |
|
spficklin
|
d37752c492
Fixed a misnamed element in the CV module, and continued development with pub module. Committing at end of day
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12 gadi atpakaļ |
|
spficklin
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7eb8154d11
Just checking in progress on Tripal pub module.
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12 gadi atpakaļ |
|
spficklin
|
80ee18623a
Added almost all PubMed XML elements to parser
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12 gadi atpakaļ |
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spficklin
|
de6323f6af
Merge branch '6.x-1.x' into 6.x-1661416-pub_module
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12 gadi atpakaļ |
