 spficklin
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2756a7cce1
Added brackets around all table names in SQL statements throughout all of Tripal
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12 роки тому |
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spficklin
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fc8149faec
Updated the GFF loader to add a date timestamp to the uniquename if none is provided in the GFF file. This ensures that the value will always be unique. Also, updated the GFF file to use the landmark_type provided by the user to look for the landmark if one is provided. Also changed the GFF loader so that it will recognize an entry for landmark using either the uniquename or the name
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12 роки тому |
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spficklin
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c423725e2a
Updated Doxygen comments
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12 роки тому |
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spficklin
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cf8e652b36
Fixed GFF loader for deleting entries in a GFF file. It was broken
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12 роки тому |
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spficklin
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c0f8f4256a
Fixed jobs report so that it updates job status whenever the page is loaded. Previously it only updated job status when a job was launched
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12 роки тому |
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spficklin
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4560a2dce9
Made some additional bug fixes and improvements to the GFF loader
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12 роки тому |
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spficklin
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8924d71248
Added support to the GFF loader for specifying target species and tyeps
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12 роки тому |
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spficklin
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8098c77257
Fixed memory leaks in OBO loader.
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12 роки тому |
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spficklin
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09b02611ed
Fixed memory leaks in the Tripal core API when storing the persistent connection. Alos fixed memory leaks in GFF loader and added loading of FASTA sequences embeded in the GFF file ##FASTA section
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12 роки тому |
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spficklin
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d702ccbc99
Bug fix with GFF loader
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12 роки тому |
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spficklin
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42fe28540f
Fixed issue #1712422. Changed all Chado querie to use chado_query() rather than db_query()
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12 роки тому |
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spficklin
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969e4bbb18
Fixed bugs in GFF loader when parsing Target= attribute
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12 роки тому |
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spficklin
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ad26575c11
Fixed bug when adding properties from GFF loader
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12 роки тому |
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spficklin
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bcd4a7eb2a
The OBO loader had a problem where it wouldn't add synonyms. It was a bug in the code. Should be fixed
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12 роки тому |
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spficklin
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cd87d5a56a
Fixed Drupal formatting standards
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12 роки тому |
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spficklin
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2a743acf56
Made transactions optional in GFF loader. Changed all appropriate db_queryt to chado_query in feature module. Added a drush command to sync a single feature (useful for debugging/testing).
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12 роки тому |
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spficklin
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02155ecfe5
Fixed bug in GFF loader
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12 роки тому |
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spficklin
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c5da76a2b4
Fixed bug in GFF loader
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12 роки тому |
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spficklin
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f21a622d67
Fixed bug in GFF loader
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12 роки тому |
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spficklin
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65f09f1e86
Fixed bug in GFF loader
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12 роки тому |
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spficklin
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d72c084643
Formatting changes for loaders output text
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12 роки тому |
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spficklin
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23f40ae194
Formatting changes for loaders output text
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12 роки тому |
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spficklin
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4a94fafe40
Fixed FASTA loader to use new API, transactions and stored procedures. Also fixed a few more memory leaks on GFF loader
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12 роки тому |
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spficklin
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7617a8ed44
Fixes to GFF loader and feature install module
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12 роки тому |
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spficklin
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5f8369abe3
Added filter to jobs page to filter by status
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12 роки тому |
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spficklin
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c04111bf50
Fixes to GFF loader
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12 роки тому |
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spficklin
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6253d06e3a
Fixed several memory leask
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12 роки тому |
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spficklin
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774562ff8e
Fixed several memory leask
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12 роки тому |
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spficklin
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716bfd6f0f
Truns out serializing the persentent chado connection set it to zero. So this was corrected
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12 роки тому |
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spficklin
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31c427a366
Added Stock Phenotypes theme
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12 роки тому |
