Commit History

Autor SHA1 Mensaxe Data
  spficklin 9d7bf94295 Changed chado_get_id_for_node API call to accept nid as second parameter and fixed all calls in all modules. Organism module can now sync, edit, upload image for an organism %!s(int64=11) %!d(string=hai) anos
  spficklin 7e1b88f37e Updated version to 6.x-1.1 in anticipation of upcoming release. Fixed bug in Features view so that the name field appears. %!s(int64=11) %!d(string=hai) anos
  Stephen Ficklin fe6b3d3f63 Added support for various publication templates %!s(int64=11) %!d(string=hai) anos
  spficklin e557f16da4 Added specific handling of Patent type publications. Fixed the tpub.obo as some of the accessions were missing the colon between the DB name and number. %!s(int64=11) %!d(string=hai) anos
  spficklin dacb3542df Added several configurable options for allow end-user to specify how to find duplicate publications %!s(int64=11) %!d(string=hai) anos
  spficklin 35ce1e2214 Fixed bug in pub module. Drupal only allows a node title to be 255 characters but the Chado pub.title field can be longer. Had to adjust for that as the publication title is the Drupal node title %!s(int64=11) %!d(string=hai) anos
  spficklin b87e95f9af Added AHAH-enabled form for sequence retrieveal %!s(int64=11) %!d(string=hai) anos
  spficklin 3d594a8509 Fixed bug in importing some publication years with PubMed and also error when loading pub %!s(int64=12) %!d(string=hai) anos
  spficklin c54ed5d667 Add trim of XML from pub importers and some in-line comments %!s(int64=12) %!d(string=hai) anos
  spficklin a7e0a0dc26 Set a default URL path for all publications to be the Chado pub ID %!s(int64=12) %!d(string=hai) anos
  spficklin 679304119b Making the imported pub email be HTML when sent %!s(int64=12) %!d(string=hai) anos
  spficklin 6cefa3cae8 Changed code so that HTML report is sent by email rather than returned on command-lie %!s(int64=12) %!d(string=hai) anos
  spficklin c200125807 Changes to pub importer %!s(int64=12) %!d(string=hai) anos
  spficklin 57ce94d058 Renamed AGRICOLA to AGL, and almost complete with that importer %!s(int64=12) %!d(string=hai) anos
  spficklin 494258474e Fixed permission problem in tripal_pub callback %!s(int64=12) %!d(string=hai) anos
  spficklin ad5c587668 Added Publication Type to the list of properties (it was missed) %!s(int64=12) %!d(string=hai) anos
  spficklin 01f50193ad Updated pub module to fix mistake in Tripal Pub ontology and other fixes %!s(int64=12) %!d(string=hai) anos
  spficklin 57c47bbf42 Fixed bug in updating pubs %!s(int64=12) %!d(string=hai) anos
  spficklin 60c4c07713 Fixed bugs with importing %!s(int64=12) %!d(string=hai) anos
  spficklin 7104bb55da Added publication search tool (non Drupal Views) %!s(int64=12) %!d(string=hai) anos
  spficklin debf07c070 Fixed bug in importing PMID %!s(int64=12) %!d(string=hai) anos
  spficklin 6bf35df5a6 Fixed bug when adding new publication with Dbxref %!s(int64=12) %!d(string=hai) anos
  spficklin aa118aca79 Fixed bugs, changed the way authors lists are stored, updated ontology %!s(int64=12) %!d(string=hai) anos
  spficklin 1400425db6 Added configuration page to tripal_pub module %!s(int64=12) %!d(string=hai) anos
  spficklin 12ce2b4c63 Fixed some bugs and imporoved the publication ontology %!s(int64=12) %!d(string=hai) anos
  spficklin a33277b5f7 Added support to insert publication type %!s(int64=12) %!d(string=hai) anos
  spficklin 0f48bf25d5 Can now update a publication and it's properties manually %!s(int64=12) %!d(string=hai) anos
  spficklin 4622aa3c46 Fixed bug with syncing organisms %!s(int64=12) %!d(string=hai) anos
  spficklin b8257936dc Fixed bug when adding a custom table that already exists. It wouldn't let it happen despite that the code was smart enough to handle it correctly. %!s(int64=12) %!d(string=hai) anos
  spficklin 155fd7da22 Continued updates to the pub module. Added a warning to the bulk loader to fail if the table description cannot be found. This could happen if a loader uses a custom table and the loader is exported to another database without the custom table %!s(int64=12) %!d(string=hai) anos