 Stephen Ficklin
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a353b39dfe
minor bug fix
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6 rokov pred |
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Stephen Ficklin
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9c92ba79ab
adustements to cv/db importing
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6 rokov pred |
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Stephen Ficklin
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3c2ec8cf11
Merge branch '525-tv3-obo_speed_colon' of github.com:tripal/tripal into 525-tv3-obo_speed_colon
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6 rokov pred |
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Stephen Ficklin
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4a06c12e72
Added fix for missing dbs
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6 rokov pred |
 bradford.condon
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112a371277
insert cv and db for borrowed terms looked up
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6 rokov pred |
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bradford.condon
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6bdcef399e
variable typos
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6 rokov pred |
|
Stephen Ficklin
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45568f2a6b
Fixed bug with borrowed terms
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6 rokov pred |
|
Stephen Ficklin
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58694fcb45
Fixed bug with EBI lookup of replaced term
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6 rokov pred |
|
Stephen Ficklin
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f98399a33b
Added a bit better error messages to help with future debugging and fixed a few bugs
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6 rokov pred |
|
Stephen Ficklin
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1ec553a37c
Fixing bugs related to borrowed terms
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6 rokov pred |
|
Stephen Ficklin
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a3ef74d309
Added additional support for finding ontology prefixes (short names)
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6 rokov pred |
|
Stephen Ficklin
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823bdbbd57
Fixed a few more bugs
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6 rokov pred |
|
Stephen Ficklin
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0e3218057d
Fixed a few bugs in the loader
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6 rokov pred |
|
Stephen Ficklin
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c8dd07b801
OBO Loader all functions complete. Restored chado_insert_cvterm
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6 rokov pred |
|
Stephen Ficklin
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dbe2f223a2
periodic checkin
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6 rokov pred |
|
Stephen Ficklin
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5f38be9175
periodic checking
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6 rokov pred |
|
Stephen Ficklin
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e8ef524896
periodic checkin
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6 rokov pred |
|
Stephen Ficklin
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19efaf5f57
improved exceptio message
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6 rokov pred |
|
Stephen Ficklin
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678409551d
Adjusted defaultcv and defaultdb
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6 rokov pred |
 Shawna Spoor
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f6586cdf7f
update to fix a flipped term name and id
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6 rokov pred |
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Shawna Spoor
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f059c52de7
fixed the error reporting when trying to write to the obo temp table
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6 rokov pred |
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Shawna Spoor
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29e3c37716
fix for the double colon issue and an update to speed up processing by writing terms to the tripalobotemp table that have been looked up remotely
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6 rokov pred |
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Bradford Condon
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af332e12a8
fix for issue 501
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6 rokov pred |
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Shawna Spoor
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f475a74a00
warning message of slow load when lookups required
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6 rokov pred |
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Shawna Spoor
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2ea7e8eb8d
one last fix to address the random null name exceptions that were getting thrown by the plant trait ontology
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6 rokov pred |
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Shawna Spoor
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87fd46f30c
still testing this fix to see if it address the slow load time
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6 rokov pred |
|
Shawna Spoor
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c8a0e23284
fix for the tripal contact obo that addresses problem on my local
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6 rokov pred |
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Shawna Spoor
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a4514e1f9a
this updated loader has loaded the plant trait ontology the GO and the plana ontology
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6 rokov pred |
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Shawna Spoor
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3a4fd90d77
functional lookup in ebi for term ids passed as names and is_a but still not working for plant trait ontology because of odd is_a implementation within it
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6 rokov pred |
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Shawna Spoor
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1a35508841
adding the test for the id being a reference and handling appropriately
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6 rokov pred |
