 spficklin
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b49f5325b2
Fixed bug with synonymn not loading in GFF file
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%!s(int64=12) %!d(string=hai) anos |
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spficklin
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ced358ba58
Added a requirement that Chado must be accessible before Tripal Views gets installed
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%!s(int64=12) %!d(string=hai) anos |
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spficklin
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8f64c6204a
Added a requirement that Chado must be accessible before Tripal Views gets installed
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%!s(int64=12) %!d(string=hai) anos |
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spficklin
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5175db48d1
Fixed bug on feature sync page
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%!s(int64=12) %!d(string=hai) anos |
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spficklin
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b4ad2e1b5d
combined object and subject relationships into a single template
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%!s(int64=12) %!d(string=hai) anos |
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spficklin
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48f972cd1b
Bug fixes
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%!s(int64=12) %!d(string=hai) anos |
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spficklin
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b32ef39d05
Merge branch '6.x-1.x' of git.drupal.org:sandbox/spficklin/1337878 into 6.x-1.x
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%!s(int64=12) %!d(string=hai) anos |
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spficklin
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feb56cc3c2
Oops left in debugging code
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%!s(int64=12) %!d(string=hai) anos |
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spficklin
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76cea3664f
Fixed some memory leaks in GFF loader and in the Core API
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%!s(int64=12) %!d(string=hai) anos |
 Lacey Sanderson
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4c2e1670f4
better output for bulk loader tripal job
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%!s(int64=12) %!d(string=hai) anos |
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Lacey Sanderson
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38c9ddef21
fix bulk loader constant display
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%!s(int64=12) %!d(string=hai) anos |
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Lacey Sanderson
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36f80a9adf
Merge branch '6.x-1.x' of git.drupal.org:sandbox/spficklin/1337878 into 6.x-1.x
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%!s(int64=12) %!d(string=hai) anos |
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Lacey Sanderson
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79368506ed
Removed print for dbxref api that was causing WSOD
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%!s(int64=12) %!d(string=hai) anos |
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spficklin
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094ec69bde
Added prepared statements for tripal_core_chado_update and fixed it so that queiries for FK, UQ and PK constraints use prepared statements too. Altered GFF loader so that all queries use prepared statements
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%!s(int64=12) %!d(string=hai) anos |
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Lacey Sanderson
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31d173505b
Changed chado_query to no longer touch and changed chado_install.php to use chado_query
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%!s(int64=12) %!d(string=hai) anos |
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Lacey Sanderson
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c2b136139d
Removed old tripal_bulk_loader list link which resulted in WSOD -there is a full listing in the admin section
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%!s(int64=12) %!d(string=hai) anos |
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Lacey Sanderson
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9c0658eac6
tripal_cv_add_cvterm() was printing to the screen causing WSOD when tripal_analysis & tripal_library modules were installed -changed to drupal_set_message()
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%!s(int64=12) %!d(string=hai) anos |
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Lacey Sanderson
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1e485a0763
Added check to modules to only add default view if tripal_views is enabled -fixes bug of broken views if tripal_views is not enabled
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%!s(int64=12) %!d(string=hai) anos |
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Lacey Sanderson
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f061e39d9e
Now chado tables are integrated on install of tripal_views and don't need the user to go to the views UI
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%!s(int64=12) %!d(string=hai) anos |
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Lacey Sanderson
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4c06e42886
Merge branch '6.x-1.x' of git.drupal.org:sandbox/spficklin/1337878 into 6.x-1.x
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%!s(int64=12) %!d(string=hai) anos |
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Lacey Sanderson
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4123a0b716
Updates default views to have a chado => node relationship which ensures added node fields are correct
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%!s(int64=12) %!d(string=hai) anos |
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Lacey Sanderson
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10b117b94f
Updates hook_views_data to call new tripal_views_add_node_relationship_to_chado_table_integration() function for tables with corresponding nodes
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%!s(int64=12) %!d(string=hai) anos |
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Lacey Sanderson
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b209bc15e9
Tweaks to the relationship chado=>node and an api function to add them
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%!s(int64=12) %!d(string=hai) anos |
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Lacey Sanderson
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6a4dce745f
Added a new API function to add the node relationship to the views integration array and made the changes to the chado relationship to node handler and the views integration code to deal with node relationships
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%!s(int64=12) %!d(string=hai) anos |
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Lacey Sanderson
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8626dd6023
Fixed chado_views_relationship_to_node views handler -now produces fully qualified joins
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%!s(int64=12) %!d(string=hai) anos |
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spficklin
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d8f85709a8
Continuing to fix feature aggreation SQL
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%!s(int64=12) %!d(string=hai) anos |
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spficklin
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f69311cda8
Fixed query that pulls flanking sequences
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%!s(int64=12) %!d(string=hai) anos |
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spficklin
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9721bd0cd4
Fixed query that pulls flanking sequences
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%!s(int64=12) %!d(string=hai) anos |
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Lacey Sanderson
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a1a2c11fbd
Changes to aggregator join handler to make more extensible
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%!s(int64=12) %!d(string=hai) anos |
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Lacey Sanderson
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170f8328d6
Default views now link to node and only show published/sync'd results if chado is local
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%!s(int64=12) %!d(string=hai) anos |
