 Stephen Ficklin
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a798519522
Fixed slowness bugs in bulk loader
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12 سال پیش |
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spficklin
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b60dcb4f26
Fixed many issues that cause memory leaks in the core and the bulk loader
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12 سال پیش |
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spficklin
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88c5a5ee89
Speedup optimizations to get bulk loader to work faster. Slowness problems were caused by core modules that set search_path and checked for existence of chado database on every query
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12 سال پیش |
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spficklin
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ff97c79d38
Fixed bug in loader
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12 سال پیش |
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spficklin
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7e587c447d
updates to loader, fixed type in core
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12 سال پیش |
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spficklin
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c3719190b6
Added a not fail option when a record is of type 'select' in the bulk loader. Altered the bulk loader to substitute primary key values into data table values so that there are less FK recursive calls. Added a new option to the tripal_core_chado_select to let someone just check if the record exists only using the unique constraint values.
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12 سال پیش |
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spficklin
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841aaa543d
added the tripal_get_custom_schema to the tripal_core_get_chado_table_schema_function. This will allow the tripal_core_chado_insert (etc) functions to work with custom tables as well. Had to fix other places in the views integration where the tripal_get_custom_schema was being called.
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12 سال پیش |
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spficklin
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ecd03c3e16
Added an interface for creating custom tables to the Tripa UI
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12 سال پیش |
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spficklin
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2840b98e85
All node types (except stock) have a function to cleanup orphaned nodes but it wasn't complete for some. A new core API function was created that all modules with node types can use to clean up orphaned nodes. Also, the drush trpjob-run command was fixed so that a username must be provided to run the job
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12 سال پیش |
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spficklin
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ef9e217d60
Fixed a bug in FK statement name construction in tripal_core_chado_[select/insert/update/delete]
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12 سال پیش |
 Lacey Sanderson
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3f0763b237
Made foreign key statement names include number of args to make unique for bulk loader
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12 سال پیش |
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Lacey Sanderson
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fb2790a90e
Added tripal_core_chado_prepare and tripal_core_chado_execute_prepared. Also added checking to ensure all arguments for a prepared statement are present before executing and added arguement comparison before saying a statement is already prepared
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12 سال پیش |
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spficklin
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38daa52d75
Re-arranged file structure for tripal_analysis and tripal_cv. Also fixed but in tripal core
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12 سال پیش |
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spficklin
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48f972cd1b
Bug fixes
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12 سال پیش |
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spficklin
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feb56cc3c2
Oops left in debugging code
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12 سال پیش |
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spficklin
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76cea3664f
Fixed some memory leaks in GFF loader and in the Core API
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12 سال پیش |
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spficklin
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094ec69bde
Added prepared statements for tripal_core_chado_update and fixed it so that queiries for FK, UQ and PK constraints use prepared statements too. Altered GFF loader so that all queries use prepared statements
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12 سال پیش |
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Lacey Sanderson
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31d173505b
Changed chado_query to no longer touch and changed chado_install.php to use chado_query
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12 سال پیش |
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spficklin
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af9610a24e
Fixed chado installer to give more noticeable failure warning, and to continue on failure
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12 سال پیش |
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spficklin
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20ad1ec24a
Updated Chado version checking to recognize an 'effective version', or just the version to the tenth's place.
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12 سال پیش |
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spficklin
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47a0862d5a
Added warning message if Drupal version is not v1.11 or v1.2. Tripal won't work without one of these versions
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12 سال پیش |
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spficklin
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c04935cb5b
Added warning message if Drupal version is not v1.11 or v1.2. Tripal won't work without one of these versions
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12 سال پیش |
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spficklin
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422684b8d2
Added warning message if Drupal version is not v1.11 or v1.2. Tripal won't work without one of these versions
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12 سال پیش |
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spficklin
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5816ad9df7
added a field and filter handler for a sequence. Also fixed a fwe butgs in the gff loader, added a new function in the feature API for generating a reverse compliment
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13 سال پیش |
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spficklin
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b98067e791
Renamed custom handlers
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13 سال پیش |
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spficklin
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339b75cf0d
added an is_prepared option to skip the automatic checking to see if the statement is prepared
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13 سال پیش |
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spficklin
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92f19d2f79
Added prepared statements for selects
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13 سال پیش |
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spficklin
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c324a8440f
Merged in 6.x-6233304-Support_for_Chado_v1.2 branch and removed non-views stocks page
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13 سال پیش |
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spficklin
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e52f91d1b9
Corrected earlier incorrect bug fix
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13 سال پیش |
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spficklin
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721ee72be0
Fixed a small bug
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13 سال پیش |
