 Stephen Ficklin
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bee0b0728e
Working on GFF loader. Fixed bug in core with featureloc table and chado_query
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11 years ago |
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Stephen Ficklin
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52c03fc8bf
Working on feature module. Can now add features + synonyms manually
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11 years ago |
 Lacey Sanderson
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b297007684
Feature: Added programmatically enable admin view menu item
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11 years ago |
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Lacey Sanderson
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f4a9e5ae37
Feature: groundwork for the new UI
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11 years ago |
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Stephen Ficklin
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e03ae0792e
Working on organism theming
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11 years ago |
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Stephen Ficklin
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4016020a94
Moved feature module to chado modules menu item
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11 years ago |
 spficklin
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455f096346
fixed merge conflicts
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11 years ago |
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spficklin
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7269960a32
Set paths for theme templates
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11 years ago |
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Lacey Sanderson
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6b3cf60a8f
Small Bug Fixes: undefined index views integration description and undefined constant BLOCK_NO_CACHE errors
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11 years ago |
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spficklin
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53b9506b4e
Preliminary commit of converted tripal_library module
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11 years ago |
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spficklin
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34bfc95115
Nightly checking
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11 years ago |
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spficklin
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7dd85b3ed0
Fixed bug in core for 7.x
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11 years ago |
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spficklin
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5d898e12aa
Working on updating feature module to Drupal 7x.
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11 years ago |
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spficklin
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d922b7a57b
Fixed minor coding review problems
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11 years ago |
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spficklin
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69e0f8271f
Merge branch '6.x-1.x' into 7.x-2.x
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11 years ago |
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spficklin
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921557cca7
Changed the way URLs for features and stocks are created. Admins can now buil the URL string using place holders
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11 years ago |
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spficklin
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ff37627b86
Added ability to set URLs for stocks. Added ability to configure format of stock and feature page titles. Changed the stock syncing to match that of features. Removed the ability to set the title for stocks and features. Titles get set automatically now.
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11 years ago |
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Stephen Ficklin
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9e3ce4187b
Added template for showing proteins on feature pages if they have a relationship of 'derives_from'
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11 years ago |
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Stephen Ficklin
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32a7b2673f
Fixed long running query for retrieving matched alignments (e.g. EST_match)
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11 years ago |
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spficklin
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8a898014b8
Renamed branch from 7.x-1.x to 7.x-2.x. Also merged bug fixes from 6.x-1.x
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11 years ago |
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spficklin
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98edb56e8d
Fixed bug in permissions for all modules that create node types. When testing if a node type should be created the function should always return true if the permission is set
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11 years ago |
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spficklin
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a43ef3d007
Made feature node use autocomplete field for type when creating/editing a feature. Also added additional docuemntation for how to add property types to analysies and featuremaps when editing/inserting
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11 years ago |
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spficklin
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a94ec98cc0
Removed interface for properties, relationships, etc. for features. and fixed bug in inserting analysis properties
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11 years ago |
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spficklin
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9d7bf94295
Changed chado_get_id_for_node API call to accept nid as second parameter and fixed all calls in all modules. Organism module can now sync, edit, upload image for an organism
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11 years ago |
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spficklin
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9530be9e77
Chado installer is fully functional in Drupla 7
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11 years ago |
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spficklin
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388824ca96
Added feature_featurepos template
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11 years ago |
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spficklin
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8c6bc34363
Added feature phenotype template
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11 years ago |
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spficklin
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1156b83efb
Added support for 'organism=genus:speices' attribute for importing GFF files
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11 years ago |
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spficklin
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57e4e62025
Changed URL path for sequence retrieval
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12 years ago |
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spficklin
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079f9f0375
Moved form elements from views module to Tripal core and updated seq extract form to use the file upload combo element. Also renamed include files to have a .inc extension rather than a .php extension in the core moduel
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12 years ago |
