 Stephen Ficklin
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a584591704
Added Map content type
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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de402b67fd
Added new chado_bundle table to link a bundle directly to a chado table. Previously it was mapped via the chado_cvterm_mapping table which mapped cvterms but wasn't exact enough for bundles. Also improved the content creation form to allow for more customization for how bundles are mapped to Chado
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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2ad2077658
Working to fix mapping of bundles to Chado tables
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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d41dbf1ca8
Added new widget, formater and instance classes
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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97801c5cd2
Nightly check-in
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%!s(int64=8) %!d(string=hai) anos |
 Chun-Huai Cheng
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bbdd00ebbc
when a new tripal content type is created. it'll insert, or update if not exsit, a new tripal_cvterm_mapping record. Added local:biomaterial and initial population of tripal_cvterm_mapping to the prepare chado function.
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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2efdb88c48
Updated taxrank OBO to use PURL and removed some drupal_write_record from API functions
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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ecafddf634
Fixed issue with RO OBO
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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c4f37fafee
Working on Views integration of fields/entities
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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7526753974
Working on cleanup of semantic web term assignments for web services
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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76681a2520
Reorganized the TripalField class and removed the attach_info() function. Broke out into two new functions: create_info and create_instance_info. This is better as it doesn't try to lump creating of a field and creating of an instance into one function and it supports all of thesettings for both operations
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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ee2027949d
Added new files for organization of semantic web support
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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5104bf6ce0
moving control of semantic web settings out of field classes
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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662962e541
Created a chado_semweb table for storing mapping of terms to Chado table columns.
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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15959fd25f
Fixed lots of bugs in the fields
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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da55d9884c
Updated Chado setup script to not reload ontologies if they are already loaded
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%!s(int64=8) %!d(string=hai) anos |
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Stephen Ficklin
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04e587b9d6
Fixed issues with field renaming
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%!s(int64=9) %!d(string=hai) anos |
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Stephen Ficklin
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9ca5f175c0
Adding support for Chado v1.3
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%!s(int64=9) %!d(string=hai) anos |
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Stephen Ficklin
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6995f47259
Adding support for Chado v1.3
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%!s(int64=9) %!d(string=hai) anos |
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Stephen Ficklin
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7000dde726
minor chang
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%!s(int64=9) %!d(string=hai) anos |
 Chun-Huai Cheng
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68e1fadfa9
Made sure the rename of tripal tables is only performed once when the site is upgraded from v2 to v3.
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%!s(int64=9) %!d(string=hai) anos |
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Stephen Ficklin
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3368a364a1
Merge branch '7.x-3.x' of github.com:tripal/tripal into 7.x-3.x
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%!s(int64=9) %!d(string=hai) anos |
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Stephen Ficklin
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05dd7daf1e
Publication importer for PMID is now working. Added missing synonym.inc field file. Started new pub field
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%!s(int64=9) %!d(string=hai) anos |
 Nick Booher
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d0d3e99d70
Fix 'Undefined offset: -1 tripal_chado.setup.inc' warning during Chado install
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%!s(int64=9) %!d(string=hai) anos |
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Stephen Ficklin
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241ac2efc3
Added a field to support synonym linker tables
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%!s(int64=9) %!d(string=hai) anos |
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Stephen Ficklin
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e9cdee4135
Cleanup of Chado install
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%!s(int64=9) %!d(string=hai) anos |
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Stephen Ficklin
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bac2b07b47
Fixing bugs related to consolidating code
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%!s(int64=9) %!d(string=hai) anos |
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Stephen Ficklin
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2e29a878e4
Creating Prepare Chado Step
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%!s(int64=9) %!d(string=hai) anos |
