 spficklin
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cd87d5a56a
Fixed Drupal formatting standards
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12 anni fa |
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spficklin
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7617a8ed44
Fixes to GFF loader and feature install module
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12 anni fa |
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spficklin
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774562ff8e
Fixed several memory leask
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12 anni fa |
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Stephen Ficklin
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226018de46
Fixed sequence formatter function & drush command
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12 anni fa |
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spficklin
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67bca35cf9
Fixed incorrectly named function, added ability to get sequence by analysi_id in sequence retrieval drush command
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12 anni fa |
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spficklin
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91184c553b
Fixed the get sequence function to work with Postgres 8.4 and fixed the annotated feature so that it can properly display overlapping parts and show the sequence in reverse complement if on the reverse strand
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12 anni fa |
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spficklin
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8f64c6204a
Added a requirement that Chado must be accessible before Tripal Views gets installed
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12 anni fa |
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spficklin
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d8f85709a8
Continuing to fix feature aggreation SQL
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12 anni fa |
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spficklin
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f69311cda8
Fixed query that pulls flanking sequences
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12 anni fa |
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spficklin
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9721bd0cd4
Fixed query that pulls flanking sequences
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12 anni fa |
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spficklin
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f0ab1a8a04
Fixed for coding standards
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12 anni fa |
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spficklin
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c2a9276bb4
Fixed minor bug in sequence output
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12 anni fa |
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spficklin
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a9c264ba29
Fixed minor bug in sequence output
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12 anni fa |
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spficklin
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d40033ae9d
Moved code for generating sequence out of the sequence field handler and into an API function in the fature_module. Also created a drush command for extracting sequences
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12 anni fa |
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spficklin
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5816ad9df7
added a field and filter handler for a sequence. Also fixed a fwe butgs in the gff loader, added a new function in the feature API for generating a reverse compliment
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12 anni fa |
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spficklin
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7b8f930310
Fixed parsing bug in GFF loader. Moved all include files into an include directory
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12 anni fa |
