 Stephen Ficklin
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e6e017890c
Made additional adjustments to sequence page
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11 gadi atpakaļ |
|
Stephen Ficklin
|
3b15f3b503
Nightly checkin .... fixed some issues that caused log entries. working on adding CDS sequences to sequence page
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11 gadi atpakaļ |
|
Stephen Ficklin
|
979660aa34
Renamed include files in the tripal_core module that didn't get renamed. Fixed sequence template to better handle original, alignment and protein sequences
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11 gadi atpakaļ |
 Lacey Sanderson
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c6fe145450
API: changed names again... hopefully the last time :)
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11 gadi atpakaļ |
|
Lacey Sanderson
|
e8d5ef6ddb
API: finished feature api including creating chado_associate_dbxref/cvterm
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11 gadi atpakaļ |
|
Lacey Sanderson
|
2e42460830
Merge branch '7.x-2.x' of git.drupal.org:sandbox/spficklin/1337878 into 7.x-2.x
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11 gadi atpakaļ |
|
Lacey Sanderson
|
00d77d137e
API: Consolidated chado_delete_property/ID and chado_update_property/ID
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11 gadi atpakaļ |
|
Lacey Sanderson
|
a73d2fa391
Feature: cleaned up and added doc
|
11 gadi atpakaļ |
|
Stephen Ficklin
|
c1b87f555b
Converted old API functions to new functions
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11 gadi atpakaļ |
 Stephen Ficklin
|
6d5887d2d3
converted all watchdog calls to the new Tripal API function
|
11 gadi atpakaļ |
|
Lacey Sanderson
|
3d39ea2833
Documention: Small tweaks to the documentation to get the defn groups to display properly in the api site
|
11 gadi atpakaļ |
|
Stephen Ficklin
|
df26ed8bea
Stock templates converted. Fixed some other templates
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11 gadi atpakaļ |
|
Stephen Ficklin
|
3df9593c8c
Cleaned out unused functions from feature module
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11 gadi atpakaļ |
|
Stephen Ficklin
|
ee855ade6e
All templates for the feature page are converted except featurepos and phenotype needs testing.
|
11 gadi atpakaļ |
|
Stephen Ficklin
|
a77526a07e
Removed ability to preview nodes. The templates are messed up in preview and it's easier to just remove the button
|
11 gadi atpakaļ |
|
spficklin
|
34bfc95115
Nightly checking
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11 gadi atpakaļ |
|
spficklin
|
d922b7a57b
Fixed minor coding review problems
|
11 gadi atpakaļ |
|
Stephen Ficklin
|
22519a8f6e
Fixed SQL on sequence retrieval for relationships
|
11 gadi atpakaļ |
|
Stephen Ficklin
|
1d831e53d8
Fixed bugs with the sequence extraction when traversing relationships
|
11 gadi atpakaļ |
|
spficklin
|
9b667e1547
Added new functionality to sequence extract function to traverse relationships
|
11 gadi atpakaļ |
|
spficklin
|
8762ae675c
Trying to fix bug in feature API call to extract feature sequence from alignment
|
11 gadi atpakaļ |
|
Stephen Ficklin
|
086eb4b649
Fixed bug in sequence retreval API function if parent has no residues
|
11 gadi atpakaļ |
|
Stephen Ficklin
|
0ab56cac4a
Updated defline of seq retreival API function to include genus and species of parent equence
|
11 gadi atpakaļ |
|
Stephen Ficklin
|
1f1a1c213a
Updated seq extract with better from field descriptions
|
11 gadi atpakaļ |
|
spficklin
|
2756a7cce1
Added brackets around all table names in SQL statements throughout all of Tripal
|
12 gadi atpakaļ |
|
spficklin
|
ed0dad3cf7
Provided some code clenup for the analysis module, added new API functions to the tripal_feature module, and added new case checking to some of the API calls in the Tripal core
|
12 gadi atpakaļ |
|
spficklin
|
c423725e2a
Updated Doxygen comments
|
12 gadi atpakaļ |
|
spficklin
|
fb42852fa2
Reorganization of functions into api, includes and theme files to make all modules consistent
|
12 gadi atpakaļ |
|
spficklin
|
b863b7fcee
Ooops type
|
12 gadi atpakaļ |
|
spficklin
|
b6444c78ad
Debugging Tripal CV module and created API function for feature relationships
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12 gadi atpakaļ |
