 Peter Richter
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e8548ad31a
Uncomment actual insertion of FeatureLocs batch
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4 年 前 |
|
Peter Richter
|
7ef8a2b7e6
Get sequence cv from $this->feature_cv
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4 年 前 |
|
Peter Richter
|
c599975d97
Use corrected fmax
|
4 年 前 |
|
Peter Richter
|
59154d4900
Fix assignFeatureIDs
|
4 年 前 |
|
Peter Richter
|
fe28ce4bf7
Update GFF3Importer - Load Dbxrefs
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4 年 前 |
 Stephen Ficklin
|
7f25c0f0dc
Updates to the GFF3 loader
|
4 年 前 |
|
Stephen Ficklin
|
4445b1c165
Fixed bug in new GFF3 loader with landmark creation
|
4 年 前 |
|
Stephen Ficklin
|
6c90a75a49
new GFF3 loader now supports aliases
|
4 年 前 |
|
Stephen Ficklin
|
d75a16a2d3
new GFF3 loader now supports featureprop and featureloc
|
4 年 前 |
|
Stephen Ficklin
|
2cd2a5e14e
Rewrite of GFF3 loader working with base features
|
4 年 前 |
|
Stephen Ficklin
|
c040951961
Testing updates to loader using ChaodRecord
|
4 年 前 |
|
Peter Richter
|
6d86c97c49
Skip validation for inserts into chado tables
|
4 年 前 |
|
Peter Richter
|
c6bdf738b3
Minor fixes in GFF3Importer
|
5 年 前 |
|
Peter Richter
|
a77aef355a
Remove "use_transaction" option from GFF Importer
|
5 年 前 |
|
Peter Richter
|
0d9f7bb97d
Use cvterm lookup table in helper methods
|
5 年 前 |
|
Stephen Ficklin
|
74b9840490
Fixed loadOntology function in the GFF3 importer to not return if it hits a failed term, but to continue. I also fixed where there were missing try catch blocks in some of the update functions and fixed some commenting
|
6 年 前 |
 bradfordcondon
|
5a8103068a
run phpstorm base style formatter
|
6 年 前 |
|
Bradford Condon
|
a959af7263
fix bug loading taxonomy importer
|
6 年 前 |
|
Bradford Condon
|
e6119f0ff4
change wording anddefaults of variable
|
6 年 前 |
|
Bradford Condon
|
b521059ebc
add checkbox for proteins to be created and simple test for successful GFF run and GFF with without protein imported
|
6 年 前 |
 Lacey-Anne Sanderson
|
907aba4d19
Merge branch '7.x-3.x' into 7.x-3.x-small_fixes
|
6 年 前 |
 Shawna Spoor
|
d4ccef15fc
changes to bring the tripal chado api module files into naming standards setout in ticket 330
|
7 年 前 |
|
Stephen Ficklin
|
baba8a48d1
Minor formatting issues, hook name correction, and GFF importer adjustment
|
7 年 前 |
|
Stephen Ficklin
|
3be9ebbdc5
Adjusted how files are constructed to improve performance.
|
7 年 前 |
|
Stephen Ficklin
|
ec05f40d17
Oops forgot to take out cardinality test in the GFF loader
|
7 年 前 |
|
Stephen Ficklin
|
ec5129476f
Fixed imporater to add a new 'files' argument to support multiple files
|
7 年 前 |
|
Stephen Ficklin
|
74783f8f63
Fixed issue #154
|
7 年 前 |
|
Stephen Ficklin
|
759eb0cc72
Merge branch '7.x-3.x' of github.com:tripal/tripal into 7.x-3.x
|
7 年 前 |
|
Stephen Ficklin
|
85d98bdce0
Added an email term for contacts
|
7 年 前 |
 Chun-Huai Cheng
|
0986d9eef3
Fixed a bug that phase 0 is not added to the insert statement
|
7 年 前 |
