 spficklin
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cd87d5a56a
Fixed Drupal formatting standards
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hace 12 años |
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spficklin
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d95e608e34
Oops forgot to take out dpm's
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hace 12 años |
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spficklin
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875cddbbcb
Fixed bug where featurelocs weren't showing up if one of the two FK relationships returned NULL
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hace 12 años |
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spficklin
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a52dc176d2
Fixed bug where featurelocs weren't showing up if one of the two FK relationships returned NULL
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hace 12 años |
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spficklin
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2a743acf56
Made transactions optional in GFF loader. Changed all appropriate db_queryt to chado_query in feature module. Added a drush command to sync a single feature (useful for debugging/testing).
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hace 12 años |
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spficklin
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87400a3502
Added hook to display args in job view
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hace 12 años |
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spficklin
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6cfe5c467e
When syncing features repetitive error logs were entered into the Drupal report log for every synced feature stating that a duplicate feature could not be inserted. This was fixed
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hace 12 años |
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spficklin
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2840b98e85
All node types (except stock) have a function to cleanup orphaned nodes but it wasn't complete for some. A new core API function was created that all modules with node types can use to clean up orphaned nodes. Also, the drush trpjob-run command was fixed so that a username must be provided to run the job
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hace 12 años |
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spficklin
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ac7081027a
Removed the feature browser from the library and anslysis pages.
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hace 12 años |
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spficklin
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138637d6eb
Fixed bug in annotated feature display
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hace 12 años |
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spficklin
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91184c553b
Fixed the get sequence function to work with Postgres 8.4 and fixed the annotated feature so that it can properly display overlapping parts and show the sequence in reverse complement if on the reverse strand
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hace 12 años |
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spficklin
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b4ad2e1b5d
combined object and subject relationships into a single template
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hace 12 años |
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spficklin
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48f972cd1b
Bug fixes
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hace 12 años |
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spficklin
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320e44d2c2
Fixed parsing bug in GFF loader. Moved all include files into an include directory
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hace 12 años |
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spficklin
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7b8f930310
Fixed parsing bug in GFF loader. Moved all include files into an include directory
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hace 12 años |
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spficklin
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3efbf1ed79
Fixed coding standards problems as found by the coder module
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hace 12 años |
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spficklin
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1d3c11b6dd
Fixed another problem with alignments
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hace 12 años |
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Stephen Ficklin
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36c67c6024
Fixed mistake in matched feature preprocess function
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hace 12 años |
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spficklin
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0778b71d77
Updating main branch with fixes to feature moduel for alignments. Also fixed but in Core API
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hace 12 años |
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Stephen Ficklin
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cfff5f8594
Merge branch '6.x-0.4-dev' of git.drupal.org:sandbox/spficklin/1337878 into 6.x-0.4-dev
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hace 12 años |
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Stephen Ficklin
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26f611ee42
Fixed watchdog calls with wrong module name
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hace 12 años |
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Stephen Ficklin
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e408d9e4a3
fixed some errors where objects were not first created
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hace 12 años |
 Lacey Sanderson
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0728c08b4a
Merge branch '6.x-0.4-dev' of git.drupal.org:sandbox/spficklin/1337878 into 6.x-0.4-dev
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hace 12 años |
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Lacey Sanderson
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63c8406e58
Coding Standards: Final cleanup for tripal_feature; added @coder-ignore for errors to be ignored
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hace 12 años |
 Pubudu Basnayaka
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688d511b07
Tripal Feature adheres to Drupal coding standards
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hace 12 años |
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Pubudu Basnayaka
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2ff2ef1ab9
Tripal Feature adheres to Drupal coding standards
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hace 12 años |
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Pubudu Basnayaka
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35583d0246
Tripal Feature adheres to Drupal coding standards
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hace 12 años |
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Stephen Ficklin
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21f247f98e
Added functionality to the Feature Summary Report on the organism page so that site admins can customize which terms appear in the list and rename the terms to make them more legible. By default the report behaves the same
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hace 12 años |
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spficklin
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af2ff151e6
Moved most extensions out. Moved base modules out of 'base' directory
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hace 13 años |
 alexgl
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c5d67e59c6
moving more modules into base and extensions respectively
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hace 13 años |
