 Stephen Ficklin
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22519a8f6e
Fixed SQL on sequence retrieval for relationships
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11 rokov pred |
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spficklin
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efc4510943
Added new functionality to sequence extract function to traverse relationships
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11 rokov pred |
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spficklin
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21b40fa629
Fixed GFF loader to give features with no ID a generic name with 1-based coordinates
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11 rokov pred |
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spficklin
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937df20c85
Continued development of seq_extract form
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11 rokov pred |
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spficklin
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2756a7cce1
Added brackets around all table names in SQL statements throughout all of Tripal
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11 rokov pred |
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spficklin
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e72aea0d18
Added ability to extract sequences by genus and specieswq!
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11 rokov pred |
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spficklin
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cd87d5a56a
Fixed Drupal formatting standards
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12 rokov pred |
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spficklin
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2a743acf56
Made transactions optional in GFF loader. Changed all appropriate db_queryt to chado_query in feature module. Added a drush command to sync a single feature (useful for debugging/testing).
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12 rokov pred |
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Stephen Ficklin
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226018de46
Fixed sequence formatter function & drush command
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12 rokov pred |
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spficklin
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74ab2abeff
Fixed get sequence drush command
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12 rokov pred |
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spficklin
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67bca35cf9
Fixed incorrectly named function, added ability to get sequence by analysi_id in sequence retrieval drush command
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12 rokov pred |
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spficklin
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91184c553b
Fixed the get sequence function to work with Postgres 8.4 and fixed the annotated feature so that it can properly display overlapping parts and show the sequence in reverse complement if on the reverse strand
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12 rokov pred |
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spficklin
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f0ab1a8a04
Fixed for coding standards
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12 rokov pred |
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spficklin
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d40033ae9d
Moved code for generating sequence out of the sequence field handler and into an API function in the fature_module. Also created a drush command for extracting sequences
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12 rokov pred |
