 Lacey Sanderson
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63c8406e58
Coding Standards: Final cleanup for tripal_feature; added @coder-ignore for errors to be ignored
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12 years ago |
 Pubudu Basnayaka
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688d511b07
Tripal Feature adheres to Drupal coding standards
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12 years ago |
 Stephen Ficklin
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0b0d4e1f49
Removed the old cvterm.php file as those API functions have been replaced. All call to those old functions have been removed
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12 years ago |
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spficklin
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af2ff151e6
Moved most extensions out. Moved base modules out of 'base' directory
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13 years ago |
 alexgl
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c5d67e59c6
moving more modules into base and extensions respectively
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13 years ago |
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spficklin
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10b5f36a72
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13 years ago |
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spficklin
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64d5b96f29
Fixed the tripal core to allow inclusion of 'NULL' values in inserts and updates. Also, added support for 'Gap', 'Target', and 'Derives_from' attributes in the GFF3 file.
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13 years ago |
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spficklin
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72355c4080
Fixed a few bugs in the GFF loader, sped up insertions and added the 'score' column of the GFF file to the 'significance' column of the featureanalysis
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13 years ago |
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spficklin
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95e1b150fc
Fixed multiple things including the following
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13 years ago |
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spficklin
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41ca848a92
Fixing mistake in subtracting 1 from fmax in featureloc entries
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13 years ago |
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spficklin
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54302f6010
Fixed indexing of featurelocs. When importing a GFF file they should be zero-based and must subtract 1. The feature theming has been updated to add 1 back.
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13 years ago |
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spficklin
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5fdf1f2b6f
Added a very simple GAF 2.0 loader for loading GO terms (specifically for Blast2GO)
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14 years ago |
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spficklin
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bcf56a9189
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14 years ago |
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spficklin
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94ef4739bb
Fixes to templates and update to GFF3 loader
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14 years ago |
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spficklin
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6e62c48178
Added support for GBrowse Chado adaptor in GFF loader
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14 years ago |
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spficklin
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d8567d8967
updates to blast, core, gff loader, etc... fixed several bugs
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14 years ago |
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spficklin
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05d50175b0
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14 years ago |
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laceysanderson
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243942d0b3
Added documentation changes
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14 years ago |
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spficklin
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b172b7459a
Fixed bug in gff loader, and added 'cancel' and 're-run' actions to the jobs page
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14 years ago |
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laceysanderson
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26939a277a
Added to documentation of tripal_feature using doxygen standards
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14 years ago |
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spficklin
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c616bca1ea
Add analysis requirement to GFF loader
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14 years ago |
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spficklin
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bc06d86bf6
Various bug fixes and themeing issues
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14 years ago |
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laceysanderson
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1c59d38e68
Re-arranged feature admin menu including adding the feature module description stub and moving the gff loader from core to feature
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14 years ago |
