Commit History

Author SHA1 Message Date
  Lacey Sanderson 63c8406e58 Coding Standards: Final cleanup for tripal_feature; added @coder-ignore for errors to be ignored 12 years ago
  Pubudu Basnayaka 688d511b07 Tripal Feature adheres to Drupal coding standards 12 years ago
  Stephen Ficklin 0b0d4e1f49 Removed the old cvterm.php file as those API functions have been replaced. All call to those old functions have been removed 12 years ago
  spficklin af2ff151e6 Moved most extensions out. Moved base modules out of 'base' directory 13 years ago
  alexgl c5d67e59c6 moving more modules into base and extensions respectively 13 years ago
  spficklin 10b5f36a72 13 years ago
  spficklin 64d5b96f29 Fixed the tripal core to allow inclusion of 'NULL' values in inserts and updates. Also, added support for 'Gap', 'Target', and 'Derives_from' attributes in the GFF3 file. 13 years ago
  spficklin 72355c4080 Fixed a few bugs in the GFF loader, sped up insertions and added the 'score' column of the GFF file to the 'significance' column of the featureanalysis 13 years ago
  spficklin 95e1b150fc Fixed multiple things including the following 13 years ago
  spficklin 41ca848a92 Fixing mistake in subtracting 1 from fmax in featureloc entries 13 years ago
  spficklin 54302f6010 Fixed indexing of featurelocs. When importing a GFF file they should be zero-based and must subtract 1. The feature theming has been updated to add 1 back. 13 years ago
  spficklin 5fdf1f2b6f Added a very simple GAF 2.0 loader for loading GO terms (specifically for Blast2GO) 14 years ago
  spficklin bcf56a9189 14 years ago
  spficklin 94ef4739bb Fixes to templates and update to GFF3 loader 14 years ago
  spficklin 6e62c48178 Added support for GBrowse Chado adaptor in GFF loader 14 years ago
  spficklin d8567d8967 updates to blast, core, gff loader, etc... fixed several bugs 14 years ago
  spficklin 05d50175b0 14 years ago
  laceysanderson 243942d0b3 Added documentation changes 14 years ago
  spficklin b172b7459a Fixed bug in gff loader, and added 'cancel' and 're-run' actions to the jobs page 14 years ago
  laceysanderson 26939a277a Added to documentation of tripal_feature using doxygen standards 14 years ago
  spficklin c616bca1ea Add analysis requirement to GFF loader 14 years ago
  spficklin bc06d86bf6 Various bug fixes and themeing issues 14 years ago
  laceysanderson 1c59d38e68 Re-arranged feature admin menu including adding the feature module description stub and moving the gff loader from core to feature 14 years ago