Commit History

Autor SHA1 Mensaxe Data
  Lacey Sanderson ecc9625d91 Publish: re-use bundle rather then re-loading it. %!s(int64=6) %!d(string=hai) anos
  Stephen Ficklin 16dcaff73d Fixed typo in the organism title tokens %!s(int64=6) %!d(string=hai) anos
  Stephen Ficklin 6e3941b018 Fixed the assay.operator_id column so the field works appropriately for it %!s(int64=6) %!d(string=hai) anos
  Stephen Ficklin 5d06f20ac2 Fixes to these fields: sep__protocol, schema__additional_type, local__contact. %!s(int64=6) %!d(string=hai) anos
  Stephen Ficklin de91c6400d This commit adds support for the protocol, assay and arraydesign tables as well as adds many new terms for chado table columns that didn't have terms associated %!s(int64=6) %!d(string=hai) anos
  Anthony Bretaudeau 3e9d9d5d2b fix minor typos %!s(int64=7) %!d(string=hai) anos
  Stephen Ficklin dcc94dc6ba Unified menu access arguments %!s(int64=7) %!d(string=hai) anos
  Stephen Ficklin d9e87077f6 Added support for Phylogenetic Tree content type and visualization field %!s(int64=7) %!d(string=hai) anos
  Stephen Ficklin 39c0ece6ad Fixed default title for organism with infraspecific name %!s(int64=7) %!d(string=hai) anos
  Stephen Ficklin ccde805a45 Added necessary code to support the biomaterial table %!s(int64=7) %!d(string=hai) anos
  Lacey Sanderson 4e62062e76 Issue #122: Updated Tripal3 Search API integration. It now conforms to the standards for Tripal/ChadoField value storage and all fields are indexable for search. %!s(int64=7) %!d(string=hai) anos
  Stephen Ficklin 542f607357 Fixed problem with contact field as well as mistake with public tables in chado_query() statements %!s(int64=7) %!d(string=hai) anos
  Stephen Ficklin 0db17d9419 Unified the way DrupalViews and WebServices handles TripalField sub elements %!s(int64=7) %!d(string=hai) anos
  Stephen Ficklin 54898a3d7e Set default title for project entities %!s(int64=7) %!d(string=hai) anos
  Chun-Huai Cheng 3ac80ad0d6 Added missing chado_cvterm_mapping for Map and Publication entity types %!s(int64=7) %!d(string=hai) anos
  Stephen Ficklin f12a6ce25e Fixed a bug when creating new content types that have properties set %!s(int64=7) %!d(string=hai) anos
  Stephen Ficklin 8843ccf83d protein sequence field is now working. Fixed relationship field to link to entities. Renamed a few new API functions %!s(int64=7) %!d(string=hai) anos
  Stephen Ficklin 4889b3fae7 Fixed issue with uploader. Added support for cvterm as a base table. Fixed bugs with OBO loader %!s(int64=7) %!d(string=hai) anos
  Stephen Ficklin b2a1444857 Added the CV and CVTerm admin pages by moving them from legacy. Creation of content types now supports record association using prop tables. Fixed a few other bugs along the way %!s(int64=7) %!d(string=hai) anos
  Stephen Ficklin 89306c0e0f Fixed issue #41 %!s(int64=7) %!d(string=hai) anos
  Stephen Ficklin ce857afcbc Nightly check-in %!s(int64=7) %!d(string=hai) anos
  Stephen Ficklin 455a1942b5 Working on new chado_bio_data_xxx tables %!s(int64=7) %!d(string=hai) anos
  Stephen Ficklin 662dce0cd9 minor bug fixes %!s(int64=7) %!d(string=hai) anos
  Stephen Ficklin 2c4e11009f Fixed default permissions %!s(int64=7) %!d(string=hai) anos
  Stephen Ficklin f66a8a4fb4 Added new field for the featuremap.unittype_id column %!s(int64=8) %!d(string=hai) anos
  Stephen Ficklin de402b67fd Added new chado_bundle table to link a bundle directly to a chado table. Previously it was mapped via the chado_cvterm_mapping table which mapped cvterms but wasn't exact enough for bundles. Also improved the content creation form to allow for more customization for how bundles are mapped to Chado %!s(int64=8) %!d(string=hai) anos
  Stephen Ficklin be77d369e7 Updating default entity titles %!s(int64=8) %!d(string=hai) anos
  Stephen Ficklin 6957932829 Adding new subclasses for fields/widgets/formatters %!s(int64=8) %!d(string=hai) anos
  Stephen Ficklin d41dbf1ca8 Added new widget, formater and instance classes %!s(int64=8) %!d(string=hai) anos
  Stephen Ficklin c92894ddd2 Fixing fields to be compatible with updated TripalField class %!s(int64=8) %!d(string=hai) anos