 Stephen Ficklin
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de91c6400d
This commit adds support for the protocol, assay and arraydesign tables as well as adds many new terms for chado table columns that didn't have terms associated
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6 vuotta sitten |
 Lacey-Anne Sanderson
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907aba4d19
Merge branch '7.x-3.x' into 7.x-3.x-small_fixes
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6 vuotta sitten |
 Shawna Spoor
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b1855c73a4
change of api function names to bring them into line with the new names outlined in github issue 330
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6 vuotta sitten |
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Stephen Ficklin
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baba8a48d1
Minor formatting issues, hook name correction, and GFF importer adjustment
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6 vuotta sitten |
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Shawna Spoor
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dd92d3229d
first round api documentation clean up
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6 vuotta sitten |
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Stephen Ficklin
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6b4676580c
Added a fix to reduce the number of queries the the information_schema.tables
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6 vuotta sitten |
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Stephen Ficklin
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d049bd99c9
Fix for issue #278
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6 vuotta sitten |
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Stephen Ficklin
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cd364447d6
Working on updating in-line documenation for Tv3 API release
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6 vuotta sitten |
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Stephen Ficklin
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164c2f77c5
Added eimage as a base table
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6 vuotta sitten |
 Anthony Bretaudeau
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d15eb0b2c9
various fixes
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7 vuotta sitten |
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Stephen Ficklin
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ccde805a45
Added necessary code to support the biomaterial table
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7 vuotta sitten |
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Stephen Ficklin
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16cd3760ce
Issue #72: Updating API to include 2.1 improvements: bea68e1
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7 vuotta sitten |
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Stephen Ficklin
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bd7d5e8c18
Issue #72: Updating API to include 2.1 improvements: 1bf62fe
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7 vuotta sitten |
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Stephen Ficklin
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7f0305dc78
Fixed Issue #110
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7 vuotta sitten |
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Stephen Ficklin
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4889b3fae7
Fixed issue with uploader. Added support for cvterm as a base table. Fixed bugs with OBO loader
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7 vuotta sitten |
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Stephen Ficklin
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3b8c1d6b63
Fixed bug with cvtermynonym being wiped out after OBO loading in Chado prepare step
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7 vuotta sitten |
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Stephen Ficklin
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c475797679
Fixed bug in chado_set_active that was cuasing the search path to not get reset
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7 vuotta sitten |
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Stephen Ficklin
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298111586d
Added Tripal Views to Tripal v3 (non legacy) and renamed Tripal Chado Views. Fixed several bugs, removed unneeded files
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7 vuotta sitten |
 Chun-Huai Cheng
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7a3d8865a0
Fixed bug for chado_linker_prop and sbo_relationship fields
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7 vuotta sitten |
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Stephen Ficklin
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8710ad6eaf
Fixed bug with upgrade form Chado v1.2 to v1.3. Fixed bug displaying publications"
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7 vuotta sitten |
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Stephen Ficklin
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45ed176259
Removed layout/fields links from content pages. Fixed bug in chado_table_exists() function.
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7 vuotta sitten |
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Stephen Ficklin
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de402b67fd
Added new chado_bundle table to link a bundle directly to a chado table. Previously it was mapped via the chado_cvterm_mapping table which mapped cvterms but wasn't exact enough for bundles. Also improved the content creation form to allow for more customization for how bundles are mapped to Chado
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8 vuotta sitten |
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Stephen Ficklin
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3bb12b4d5a
Fixed problems with slow loading
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8 vuotta sitten |
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Stephen Ficklin
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8af937f449
Adjusted entity creation to use the tripal_cvterm_mapping table
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8 vuotta sitten |
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Stephen Ficklin
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6cd8b469b8
Fixes from 2.x copied over to 3.x
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8 vuotta sitten |
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Stephen Ficklin
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ee2027949d
Added new files for organization of semantic web support
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8 vuotta sitten |
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Stephen Ficklin
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9ca5f175c0
Adding support for Chado v1.3
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8 vuotta sitten |
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Stephen Ficklin
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7d7e8fcf97
Fix to Chado API for major Drupal upgrades
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8 vuotta sitten |
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Stephen Ficklin
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8ed6d457a5
Reworking to move node specific code to legacy directory and Chado specific code to the tripal_chado module. Created a new 'tripal' module to replace 'tripal_core'
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9 vuotta sitten |
