 Stephen Ficklin
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213f35c56d
Fixed issue #533
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6 éve |
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Stephen Ficklin
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3e49cbd827
Merge branch '7.x-3.x' into fix-tv3-rc3_pre_release
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6 éve |
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Stephen Ficklin
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0ca00c8031
Fixed a bug where ontologies loading during preparing don't get the cvtermpath updated and a field being added for the pub.pub_id field (same problem as the analysis fix previously committed
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6 éve |
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Stephen Ficklin
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70c112eb68
Fixed warning about missing 'short_name' after fresh install
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6 éve |
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Stephen Ficklin
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1ef659f361
Added some output to help when upgrading a large tripal site. Preparing Chado can take a while
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6 éve |
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Stephen Ficklin
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8998ca476f
Removed unwanted comma in SQL
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6 éve |
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Stephen Ficklin
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787958a55c
Because the prepare is now required for Tripal v2->v3 upgrade I have updated the prepare instructions and removed the skip button
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6 éve |
 Shawna Spoor
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9096723c9a
found deprecated terms that needed to be swapped out
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6 éve |
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Shawna Spoor
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d4ccef15fc
changes to bring the tripal chado api module files into naming standards setout in ticket 330
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6 éve |
 Lacey Sanderson
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6995d06345
Bug Fix: Better error message during prepare chado when fail creating content type.
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6 éve |
 Lacey Sanderson
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b305ab18f8
Chado Prepare Bug: Create Custom table tries to redirect which fails with Drush
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6 éve |
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Stephen Ficklin
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54e848aee5
Clean-ed up the cv/lookup and added a simple tree browser that could use some improvement
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6 éve |
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Stephen Ficklin
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d9e87077f6
Added support for Phylogenetic Tree content type and visualization field
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7 éve |
 Anthony Bretaudeau
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d15eb0b2c9
various fixes
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7 éve |
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Stephen Ficklin
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7dd9325d6a
Merge remote-tracking branch 'origin/7.x-3.x-installprofile' into 7.x-3.x
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7 éve |
|
Stephen Ficklin
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f853f19cb6
Changed Analysis content type to use operation:2945 term. issue #151
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7 éve |
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Shawna Spoor
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1553ac902d
new drush command for installing tripal
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7 éve |
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Stephen Ficklin
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6b78d9da21
Added biological sample entity type
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7 éve |
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Lacey Sanderson
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baaa1a4cbd
Small fixes related to progress reporting for publishing entities.
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7 éve |
|
Lacey Sanderson
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547834a78a
Fix to prepare chado which allows the function to be run outside of a Tripal Job.
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7 éve |
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Lacey Sanderson
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4cbf24071e
Ensured that all completed jobs show 100% progress and added arbitrary progress reporting to the Prepare Chado job.
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7 éve |
|
Stephen Ficklin
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841169aa5e
Removed unneeded include when launching prepare job
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7 éve |
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Lacey Sanderson
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f9644f2513
Bug Fix during Chado Prepare: unable to look up dbxref due to vocab and accession not being included in the instance details.
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7 éve |
 Chun-Huai Cheng
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3ac80ad0d6
Added missing chado_cvterm_mapping for Map and Publication entity types
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7 éve |
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Lacey Sanderson
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4c8f762c15
Prepare Chado: Quick Type fix.
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7 éve |
|
Stephen Ficklin
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0290450c32
Fix to tripal.install and to Chado prepare function
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7 éve |
|
Stephen Ficklin
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0018be0880
Updated TripalImporter
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7 éve |
|
Stephen Ficklin
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74cfacc807
Added upload file permission
|
7 éve |
|
Stephen Ficklin
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01b134e1bf
Fixed bug in setup/prepare step
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7 éve |
|
Stephen Ficklin
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90bd7cd4e7
Finishgin up TripalJob and TripalImporter classes'
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7 éve |
