organism;
// expand the featuremap object to include the records from the featurepos table
// specify the number of features to show by default and the unique pager ID
$num_results_per_page = 25;
$pager_id = 3;
// get the features aligned on this map
$options = [
'return_array' => 1,
'order_by' => ['name' => 'ASC'],
'pager' => [
'limit' => $num_results_per_page,
'element' => $pager_id,
],
'include_fk' => [
'type_id' => 1,
],
];
$organism = chado_expand_var($organism, 'table', 'stock', $options);
$stocks = $organism->stock;
// get the total number of records
$total_records = chado_pager_get_count($pager_id);
if (count($stocks) > 0) { ?>
This
organism is associated with
stock(s):
name;
if (!$name) {
$name = $stock->uniquename;
}
if (property_exists($stock, 'nid')) {
$name = l($name, "node/$stock->nid", ['attributes' => ['target' => '_blank']]);
}
$rows[] = [
$name,
$stock->type_id->name,
];
}
// the $table array contains the headers and rows array as well as other
// options for controlling the display of the table. Additional
// documentation can be found here:
// https://api.drupal.org/api/drupal/includes%21theme.inc/function/theme_table/7
$table = [
'header' => $headers,
'rows' => $rows,
'attributes' => [
'id' => 'tripal_organism-table-stocks',
'class' => 'tripal-data-table',
],
'sticky' => FALSE,
'caption' => '',
'colgroups' => [],
'empty' => '',
];
// once we have our table array structure defined, we call Drupal's theme_table()
// function to generate the table.
print theme_table($table);
// the $pager array values that control the behavior of the pager. For
// documentation on the values allows in this array see:
// https://api.drupal.org/api/drupal/includes!pager.inc/function/theme_pager/7
// here we add the paramter 'block' => 'features'. This is because
// the pager is not on the default block that appears. When the user clicks a
// page number we want the browser to re-appear with the page is loaded.
// We remove the 'pane' parameter from the original query parameters because
// Drupal won't reset the parameter if it already exists.
$get = $_GET;
unset($_GET['pane']);
$pager = [
'tags' => [],
'element' => $pager_id,
'parameters' => [
'pane' => 'stocks',
],
'quantity' => $num_results_per_page,
];
print theme_pager($pager);
$_GET = $get;
}