t('Add a Property Type'), 'description' => t('This record may have any number of properties. Use this field to first add the type.'), 'default_widget' => 'chado_linker__prop_adder_widget', 'default_formatter' => 'hidden', 'settings' => array(), 'storage' => array( 'type' => 'field_chado_storage', 'module' => 'tripal_chado', 'active' => TRUE ), 'no_ui' => TRUE ); } /** * Implements hook_attach_info(). * * This is a hook provided by the tripal_Chado module. It allows the field * to specify which bundles it will attach to and to specify thee settings. * * @param $entity_type * @param $entity * @param $term * * @return * A field array */ function chado_linker__prop_adder_attach_info($entity_type, $bundle, $target) { $field_info = array(); $table_name = $target['data_table']; $type_table = $target['type_table']; $type_field = $target['field']; $cv_id = $target['cv_id']; $cvterm_id = $target['cvterm_id']; // If the linker table does not exists then we don't want to add attach. $prop_table = $table_name . 'prop'; if (!chado_table_exists($prop_table)) { return $field_info; } // Initialize the field array. $field_info = array( 'field_name' => $prop_table, 'field_type' => 'chado_linker__prop_adder', 'widget_type' => 'chado_linker__prop_adder_widget', 'field_settings' => array( 'base_table' => $table_name, ), 'cardinality' => 1, 'storage' => 'field_chado_storage', 'widget_settings' => array('display_label' => 1), 'description' => '', 'label' => 'Additional Properties', 'is_required' => 0, // This feld is never visible so there are no field settings for // Chado nor the semantic web. ); return $field_info; } /** * Implements hook_widget_info. * * This is a hook provided by the tripal_chado module for offloading * the hook_field_widget_info() hook for each field to specify. */ function chado_linker__prop_adder_widget_info() { return array( 'label' => t('Add a Property'), 'field types' => array('chado_linker__prop_adder'), ); } /** * */ function chado_linker__prop_adder_widget(&$widget, $form, $form_state, $field, $instance, $langcode, $items, $delta, $element) { // This field has no value field. Just a fieldset for adding new properties. $widget['#element_validate'] = array('chado_linker__prop_adder_widget_validate'); $widget['#type'] = 'fieldset'; $widget['#title'] = $element['#title']; $widget['#description'] = $element['#description']; $widget['#group'] = 'entity_form_vtabs'; $widget['kvproperty_instructions'] = array( '#type' => 'item', '#markup' => t('You may add additional properties to this form by providing a property name (from a vocabulary) in the field below and clicking the "Add Property" button. This will add a new field to the form above for the property you entered. In the future, this field will be present for all records of this type.'), ); $widget['value'] = array( '#title' => t('Property Type'), '#type' => 'textfield', '#description' => t("Please enter the type of property that you want to add. As you type, suggestions will be provided."), '#autocomplete_path' => "admin/tripal/storage/chado/auto_name/cvterm/", ); $widget['kvproperty_adder_link'] = array( '#type' => 'item', '#markup' => '' . l('Add a term', 'admin/tripal/vocab/cvterm/add', array('attributes' => array('target' => '_blank'))) . '', ); // When this button is clicked, the form will be validated and submitted. // Therefore, we set custom submit and validate functions to override the // default form submit. In the validate function we set the form_state // to rebuild the form so the submit function never actually gets called, // but we need it or Drupal will run the default validate anyway. // we also set #limit_validation_errors to empty so fields that // are required that don't have values won't generate warnings. $widget['kvproperty_adder_button'] = array( '#value' => t('Add Property'), '#type' => 'submit', '#name' => 'kvproperty_adder_button', '#submit' => array('chado_linker__prop_adder_widget_submit'), '#limit_validation_errors' => array(array($field['field_name'])), ); } /** * Callback function for validating the chado_linker__prop_adder_widget. */ function chado_linker__prop_adder_widget_validate($element, &$form_state) { // Add the new field to the entity if (array_key_exists('triggering_element', $form_state) and $form_state['triggering_element']['#name'] == 'kvproperty_adder_button') { $form_state['rebuild'] = TRUE; $field_name = $element['#field_name']; $entity_type = $element['#entity']->type; $bundle = $element['#entity']->bundle; // Get the base table name from the field properties. $field = field_info_field($field_name); $base_table = $field['settings']['base_table']; // Get the term for the property $kvproperty = tripal_chado_get_field_form_values($field_name, $form_state); $term = chado_generate_var('cvterm', array('name' => $kvproperty), $options = array('return_array' => TRUE)); if (count($term) == 1) { $prop_field_name = $field_name . '__' . $term[0]->cvterm_id; // The field name is the table name in this case. We want to get the // primary key as this should be the field that maps th the value. $schema = chado_get_schema($field_name); $pkey = $schema['primary key'][0]; $field_info = array( 'field_type' => 'kvproperty', 'widget_type' => 'tripal_chado_kvproperty_widget', 'field_settings' => array( 'chado_table' => $field_name, 'chado_column' => $pkey, 'base_table' => $base_table, ), 'storage' => 'field_chado_storage', 'widget_settings' => array(), 'description' => $term[0]->definition ? $term[0]->definition : '', 'label' => ucfirst(preg_replace('/_/', ' ', $term[0]->name)), 'is_required' => FALSE, // All properties are unlimited. 'cardinality' => FIELD_CARDINALITY_UNLIMITED, ); tripal_add_bundle_field($prop_field_name, $field_info, $entity_type, $bundle); } else if (count($term) > 1) { form_set_error(implode('][', $element ['#parents']) . '][value', t("This term is present in multiple vocabularies. Please select the appropriate one.")); } else { form_set_error(implode('][', $element ['#parents']) . '][value', t("Please provide a property type to add.")); } } } /** * Callback function for submitting the chado_linker__prop_adder_widget. */ function chado_linker__prop_adder_widget_submit($element, &$form_state) { }