');
$breadcrumb[] = l('Administration', 'admin');
$breadcrumb[] = l('Tripal', 'admin/tripal');
$breadcrumb[] = l('Chado', 'admin/tripal/legacy');
$breadcrumb[] = l('Stocks', 'admin/tripal/legacy/tripal_stock');
drupal_set_breadcrumb($breadcrumb);
// Add the view
$view = views_embed_view('tripal_stock_admin_stocks','default');
if (isset($view)) {
$output .= $view;
}
else {
$output .= '
The Stock module uses primarily views to provide an '
. 'administrative interface. Currently one or more views needed for this '
. 'administrative interface are disabled. Click each of the following links to '
. 'enable the pertinent views:
';
$output .= '';
$output .= '- '.l('Stocks View', 'admin/tripal/legacy/tripal_stock/views/stocks/enable').'
';
$output .= '
';
}
return $output;
}
/**
* Provide administration options for chado_stocks
*
* @return
* Form array (as described by the drupal form api)
*
* @ingroup tripal_legacy_stock
*/
function tripal_stock_admin() {
$form = array();
// STOCK PAGE TITLES CONFIGURATION
$details = array(
'module' => 'tripal_stock',
'content_type' => 'chado_stock',
'options' => array(
'[stock.name]' => 'Stock Name Only',
'[stock.uniquename]' => 'Stock Unique Name Only',
'[stock.name], [stock.uniquename] ([stock.type_id>cvterm.name]) [stock.organism_id>organism.genus] [stock.organism_id>organism.species]' => 'Unique Contraint: Includes the name, uniquename, type and scientific name'
),
'unique_option' => '[stock.name], [stock.uniquename] ([stock.type_id>cvterm.name]) [stock.organism_id>organism.genus] [stock.organism_id>organism.species]'
);
chado_add_admin_form_set_title($form, $form_state, $details);
// URL ALIAS
$details = array(
'module' => 'tripal_stock',
'content_type' => 'chado_stock',
'options' => array(
'/stock/[stock.stock_id]' => 'Stock ID',
'/stock/[stock.organism_id>organism.genus]/[stock.organism_id>organism.species]/[stock.type_id>cvterm.name]/[stock.uniquename]' => 'Unique Contraint: Includes the name, uniquename, type and scientific name'
),
);
// This call adds the configuration form to your current form
// This sub-form handles it's own validation & submit
chado_add_admin_form_set_url($form, $form_state, $details);
return system_settings_form($form);
}
/**
* Implements hook_form_validate(): Validates user input
*
* @param $form
* An array describing the form that was rendered
* @param $form_state
* An array describing the current state of the form including user input
*
* @ingroup tripal_legacy_stock
*/
function tripal_stock_admin_validate($form, &$form_state) {
global $user; // we need access to the user info
$job_args = array();
switch ($form_state['values']['op']) {
case t('Set Controlled Vacabularies') :
break;
case t('Clean up orphaned stocks') :
tripal_add_job('Cleanup orphaned stocks', 'tripal_stock',
'tripal_stock_cleanup', $job_args, $user->uid);
break;
}
}