library; $options = array('return_array' => 1); $library = chado_expand_var($library, 'table', 'library_cvterm', $options); $terms = $library->library_cvterm; // order the terms by CV $s_terms = array(); if ($terms) { foreach ($terms as $term) { $s_terms[$term->cvterm_id->cv_id->name][] = $term; } } if (count($s_terms) > 0) { ?>
The following terms have been associated with this library->type_id->name ?>:
$terms) { // the $headers array is an array of fields to use as the colum headers. // additional documentation can be found here // https://api.drupal.org/api/drupal/includes%21theme.inc/function/theme_table/7 $headers = array('Term', 'Definition'); // the $rows array contains an array of rows where each row is an array // of values for each column of the table in that row. Additional documentation // can be found here: // https://api.drupal.org/api/drupal/includes%21theme.inc/function/theme_table/7 $rows = array(); foreach ($terms as $term) { $accession = $term->cvterm_id->dbxref_id->accession; if (is_numeric($term->cvterm_id->dbxref_id->accession)) { $accession = $term->cvterm_id->dbxref_id->db_id->name . ":" . $term->cvterm_id->dbxref_id->accession; } if ($term->cvterm_id->dbxref_id->db_id->urlprefix) { $accession = l($accession, $term->cvterm_id->dbxref_id->db_id->urlprefix . $accession, array('attributes' => array("target" => '_blank'))); } $rows[] = array( $accession, $term->cvterm_id->name ); } // the $table array contains the headers and rows array as well as other // options for controlling the display of the table. Additional // documentation can be found here: // https://api.drupal.org/api/drupal/includes%21theme.inc/function/theme_table/7 $table = array( 'header' => $headers, 'rows' => $rows, 'attributes' => array( 'id' => "tripal_library-table-terms-$i", 'class' => 'tripal-data-table' ), 'sticky' => FALSE, 'caption' => 'Vocabulary: ' . ucwords(preg_replace('/_/', ' ', $cv)) . '', 'colgroups' => array(), 'empty' => '', ); // once we have our table array structure defined, we call Drupal's theme_table() // function to generate the table. print theme_table($table); $i++; } } ?>