<?php /************************************************************************* * @file: THIS IS A TEMPLATE AND SHOULD NOT BE INCLUDED IN THE MODULE CODE * * - simply replace all XXX with the original chado table you want to join to it's drupal nodes. * (ie: If you want to join features to their drupal nodes then XXX=feature) * * NOTE: Creating the table definition file is not enough. You also need to call the * retrieve_XXX_views_data() function from ../tripal_cv.views.inc:tripal_cv_views_data() * by adding the following line: * $data = array_merge($data, retrieve_XXX_views_data()); * to the function and including the file directly above the function (blow the function * header by adding: * require_once('views/XXX.views.inc'); * * REMOVE THIS COMMENT IN THE COPY! */ /** * @file * This file defines the data array for a given chado table. This array * is merged into a larger array containing definitions of all tables associated * with this module in: * @see tripal_cv.views.inc --in tripal_cv_views_data() * * Note: All chado tables are joined to their drupal nodes through the chado_XXX linking table. * This file simply defines this linking table and joins the three tables together. * No modification of XXX.views.inc is needed. * * Documentation on views integration can be found at * http://views2.logrus.com/doc/html/index.html. */ /** * Purpose: this function returns the portion of the data array * which describes the chado_XXX drupal table, it's fields and any joins between it * and other tables * @see tripal_cv_views_data() --in tripal_cv.views.inc * * The main need for description of this table to views is to join chado data with drupal nodes * */ function retrieve_chado_XXX_views_data () { global $db_url; $data = array(); // if the chado database is not local to the drupal database // then we need to set the database name. This should always // be 'chado'. if(is_array($db_url) and array_key_exists('chado',$db_url)){ // return empty data array b/c if chado is external then no join to the nodetable can be made return $data; } //Basic table definition----------------------------------- $data['chado_XXX']['table'] = array( 'field' => 'nid', ); //Relationship Definitions--------------------------------- // Note: No joins need to be made from $data['XXX']['table'] // Join the chado_XXX table to XXX $data['chado_XXX']['table']['join']['XXX'] = array( 'left_field' => 'XXX_id', 'field' => 'XXX_id', ); // Join the node table to chado_XXX $data['node']['table']['join']['chado_XXX'] = array( 'left_field' => 'nid', 'field' => 'nid', ); // Join the node table to XXX $data['node']['table']['join']['XXX'] = array( 'left_table' => 'chado_XXX', 'left_field' => 'nid', 'field' => 'nid', ); return $data; }