'cvterm_id', 'title' => t('go count organism table'), 'help' => t("go count organism table contains mview data."), //garbage explanation for now ); $data['go_count_organism']['cvname'] = array( 'title' => t('cvname text field'), 'help' => t(' text field.'), 'field' => array( 'handler' => 'views_handler_field', 'click sortable' => TRUE, ), 'sort' => array( 'handler' => 'views_handler_sort', ), 'filter' => array( 'handler' => 'views_handler_filter_string', ), 'argument' => array( 'handler' => 'views_handler_argument_string', ), ); $data['go_count_organism']['cvterm_id'] = array( 'title' => t('cvterm_id numeric field'), 'help' => t(' numeric field.'), 'field' => array( 'handler' => 'views_handler_field_numeric', 'click sortable' => TRUE, ), 'filter' => array( 'handler' => 'views_handler_filter_numeric', ), 'sort' => array( 'handler' => 'views_handler_sort', ), ); $data['go_count_organism']['organism_id'] = array( 'title' => t('organism_id numeric field'), 'help' => t(' numeric field.'), 'field' => array( 'handler' => 'views_handler_field_numeric', 'click sortable' => TRUE, ), 'filter' => array( 'handler' => 'views_handler_filter_numeric', ), 'sort' => array( 'handler' => 'views_handler_sort', ), ); $data['go_count_organism']['feature_count'] = array( 'title' => t('feature_count numeric field'), 'help' => t(' numeric field.'), 'field' => array( 'handler' => 'views_handler_field_numeric', 'click sortable' => TRUE, ), 'filter' => array( 'handler' => 'views_handler_filter_numeric', ), 'sort' => array( 'handler' => 'views_handler_sort', ), ); */ $tvi_query = db_query('SELECT * FROM public.tripal_views_integration'); //tvi = tripal_views_integration while($tvi_row = db_fetch_object($tvi_query)){ //ids we'll use for queries $setup_id = $tvi_row->setup_id; $mview_id = $tvi_row->mview_id; //let's get the name of the table $mview_table = db_fetch_object(db_query("SELECT name, mv_specs FROM {tripal_mviews} WHERE mview_id = '$mview_id';")); //use name from above and description from $tvi_row $data[$mview_table->name]['table']['group'] = t($tvi_row->description); //TODO: this need to be a base table! so need logic to figure out the primary key of this table, on the fly $data[$mview_table->name]['table']['base'] = array( 'title' => t($tvi_row->name), 'help' => t($tvi_row->description), //garbage explanation for now ); //let's add fields //tmj = tripal_mviews_join $tmj_query = db_query("SELECT * FROM public.tripal_mviews_join WHERE setup_id = '$setup_id'"); $i = 0; while($tmj_row = db_fetch_object($tmj_query)){ $column_name = $tmj_row->view_column; $handlers = db_fetch_object(db_query("SELECT handler_filter, handler_field FROM {tripal_views_handlers} WHERE setup_id = '$setup_id' AND column_name = '$column_name';")); //handlers would be used $handlers->handler_filter, $handlers->handler_field etc, thuogh may need to include new ones in this query or do select * //let's use handlers we retrieved from above $data[$mview_table->name][$tmj_row->view_column] = array( 'title' => t($tmj_row->view_column), 'help' => t("**"), 'field' => array( 'handler' => 'views_handler_field', 'click sortable' => TRUE, ), 'sort' => array( 'handler' => 'views_handler_sort', ), 'filter' => array( 'handler' => 'views_handler_filter_string', ), 'argument' => array( 'handler' => 'views_handler_argument_string', ), ); /*TODO: get join info here per mview field*/ $chado_join_field = $tmj_row->chado_table_join; $chado_join_column = $tmj_row->chado_column; $join_column = $tmj_row->view_column; $data[$mview_table->name]['table']['join'] = array( // Index this array by the table name to which this table refers. // 'left_field' is the primary key in the referenced table. // 'field' is the foreign key in this table. "$chado_join_field" => array( 'left_field' => $chado_join_column, 'field' => $join_column, ), ); $i++; } } dpm("in tripal_views_integration file", 'dpm'); dpm($data, 'data'); return $data; }